BO23774.complete Sequence
688 bp assembled on 2010-04-13
GenBank Submission: KX797224
> BO23774.complete
GAAGTTATCAGTCGACATGTGTTTTTGCTGTGCTCGATTAATTAGTGGAT
CGTCACGGAACTGGAGTTATAAAGTAAGCCGACGGTGCCAGACGAAGCTC
AGACTGACTAAAAAAATGGCCCGGCATATAGCCCTGCTGATCTGCTCATT
GCTAGCGATGGCTGGCTGTGATCCAATCGATGTGGACTGTACTCGCAGAC
AGGATTTCAATATTGTCAAGGACTGCTGTGTCTATCCCACATTTAGGTTT
GACCAGTTCAAAAGCCAGTGTGGTAAATATATGCCAGTTGGTGCTCCCAG
AATTTCACCCTGCCTCTATGAATGCATTTTCAATAAGACCAACACAGTTG
TGGACGGAGCTATTCATCCTGACAATGCCCGACTCATGCTGGAGAAGCTT
TTCGGTAATCAGGACTTTGAAGAAGCCTATTTCAATGGTTTAATGGGCTG
TTCGGATTCTGTGCAAGAGATGATTAGCAACAGGAGGTCACGGCCCCAAA
GAAAAACAGAACAATGCTCTCCATTCTCACTTTTCTATGGAATTTGTGCC
CAGAGATATGTCTTCAACCATTGTCCATCATCCAGCTGGTCCGGCACTGA
ATCTTGCGAAATGGCCCGATTGCAGAACATGAACTGTTCGAAACCATCAC
GTGGTTCTAGTCATCGCCTTGCAAGCTTTCTAGACCAT
BO23774.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:29:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50c-RC | 558 | CG30072-PC | 1..555 | 116..670 | 2775 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:29:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50b-RB | 1648 | CG30073-RB | 960..1613 | 17..670 | 3270 | 100 | Plus |
| Obp50c-RC | 1648 | CG30072-RC | 960..1613 | 17..670 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:29:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14372612..14372971 | 311..670 | 1800 | 100 | Plus |
| 2R | 25286936 | 2R | 14372199..14372393 | 17..211 | 975 | 100 | Plus |
| 2R | 25286936 | 2R | 14372457..14372555 | 212..310 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:29:25 has no hits.
BO23774.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:23:59 Download gff for
BO23774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50c-RA | 546..1199 | 17..672 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:16:23 Download gff for
BO23774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50c-RB | 960..1613 | 17..672 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:11:43 Download gff for
BO23774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50c-RC | 960..1613 | 17..672 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:11:43 Download gff for
BO23774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14372199..14372393 | 17..211 | 100 | -> | Plus |
| 2R | 14372457..14372555 | 212..310 | 100 | -> | Plus |
| 2R | 14372612..14372971 | 311..672 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:16:23 Download gff for
BO23774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10259704..10259898 | 17..211 | 100 | -> | Plus |
| arm_2R | 10259962..10260060 | 212..310 | 100 | -> | Plus |
| arm_2R | 10260117..10260476 | 311..672 | 99 | | Plus |
BO23774.pep Sequence
Translation from 16 to 688
> BO23774.pep
MCFCCARLISGSSRNWSYKVSRRCQTKLRLTKKMARHIALLICSLLAMAG
CDPIDVDCTRRQDFNIVKDCCVYPTFRFDQFKSQCGKYMPVGAPRISPCL
YECIFNKTNTVVDGAIHPDNARLMLEKLFGNQDFEEAYFNGLMGCSDSVQ
EMISNRRSRPQRKTEQCSPFSLFYGICAQRYVFNHCPSSSWSGTESCEMA
RLQNMNCSKPSRGSSHRLASFLDH
BO23774.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:17:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50c-PC | 185 | CG30072-PC | 1..185 | 34..218 | 1015 | 100 | Plus |
| Obp50d-PA | 173 | CG30074-PA | 1..170 | 34..207 | 286 | 30.5 | Plus |
