BO23786.complete Sequence
373 bp assembled on 2010-04-13
GenBank Submission: KX795965
> BO23786.complete
GAAGTTATCAGTCGACATGTCGTTGCTGCTGCTCCTTTTGGCCGTCATCC
TGCCGCAGCGGCAGCTTCTGCCCTTCGTATCCGGAGGGTCCTGCCGGGAG
GCGCAGCTCTGCTGCAACGGCCGCGACTCGTCCTGCGTCGTCCAGAAGGC
TCCCATCAATGCCATCATCGAGGATCTCAGCGACAAGCCCTGCTACTGTG
ACCACGCCTGCCTCAAGCTCGGCGATTGCTGCGACGACTTCAAGGATCAC
TGTGGAGGAGTCTTTAGGCGCCGAAAACTGAAGTCCATCCATCTGGCAGC
CGGAAACTGCCATAAGCACGGATCCGTTAAGAATGCAGCTGCAATGGCAA
TGATTGCAAGCTTTCTAGACCAT
BO23786.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:59:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42339-RA | 342 | CG42339-PA | 1..339 | 17..355 | 1695 | 100 | Plus |
| CG42339-RB | 1188 | CG42339-PB | 1..241 | 17..257 | 1205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:59:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42339-RA | 656 | CG42339-RA | 97..435 | 17..355 | 1695 | 100 | Plus |
| CG42339-RB | 2354 | CG15204-RA | 145..385 | 17..257 | 1205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:59:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11037474..11037715 | 258..17 | 1210 | 100 | Minus |
| X | 23542271 | X | 11036111..11036210 | 355..256 | 500 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 13:59:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6802..6931 | 136..8 | 116 | 57.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6797..6846 | 70..18 | 113 | 73.6 | Minus |
BO23786.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:04 Download gff for
BO23786.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42339-RA | 97..435 | 17..357 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:37:28 Download gff for
BO23786.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42339-RA | 97..435 | 17..357 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:31:21 Download gff for
BO23786.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42339-RA | 97..435 | 17..357 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:31:21 Download gff for
BO23786.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11036108..11036208 | 258..357 | 98 | <- | Minus |
| X | 11037475..11037715 | 17..257 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:37:28 Download gff for
BO23786.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10930141..10930241 | 258..357 | 98 | <- | Minus |
| arm_X | 10931508..10931748 | 17..257 | 100 | | Minus |
BO23786.pep Sequence
Translation from 16 to 373
> BO23786.pep
MSLLLLLLAVILPQRQLLPFVSGGSCREAQLCCNGRDSSCVVQKAPINAI
IEDLSDKPCYCDHACLKLGDCCDDFKDHCGGVFRRRKLKSIHLAAGNCHK
HGSVKNAAAMAMIASFLDH
BO23786.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:18:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42339-PA | 113 | CG12626-PA | 1..113 | 1..113 | 611 | 100 | Plus |
| CG42339-PB | 395 | CG15204-PA | 1..80 | 1..80 | 441 | 100 | Plus |
