Clone BO23790 Report

Search the DGRC for BO23790

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:237
Well:90
Vector:pDNR-Dual
Associated Gene/TranscriptCG15357-RA
Protein status:BO23790.pep: Imported from assembly
Sequenced Size:379

Clone Sequence Records

BO23790.complete Sequence

379 bp assembled on 2010-04-13

GenBank Submission: KX798475

> BO23790.complete
GAAGTTATCAGTCGACATGACTTGCGAAGTGCAGAATTTCATAGATGGCA
TGTCGCAGACTTTTTGTAAGCACAAAGAGATGCGCAAATGCCAAATGCTC
GAGATCCTGGACAAAGTGCGCTCCTGCGATTGCTGCCACAAAAGAAGGCT
AAACAACTGCCGGATGGTTAAGTCTGGAGGCCGGAAGCCCGCATCCCAGG
GCTGGACACTCTACCTCATCGCCGCCTGCTTCGCATTACTCCTGCTCATG
ATCATCTATATGATCCATGTGGCCAGAAGATATAACCATGTTCGAGCCTA
CGGCAGCAGCGCCTGCGGATCCACTTTGTTCTACAGCTACAGCGACTGCG
ATGTGTTCTACGCAAGCTTTCTAGACCAT

BO23790.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:18:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG15357-RB 348 CG15357-PB 1..345 17..361 1725 100 Plus
CG15357-RA 348 CG15357-PA 1..345 17..361 1725 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:18:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG15357-RB 560 CG15357-RB 58..402 17..361 1725 100 Plus
CG15357-RA 485 CG15357-RA 58..402 17..361 1725 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:18:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1945308..1945652 361..17 1725 100 Minus
Blast to na_te.dros performed on 2014-11-27 10:18:17 has no hits.

BO23790.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:33 Download gff for BO23790.complete
Subject Subject Range Query Range Percent Splice Strand
CG15357-RA 58..402 17..363 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:06:57 Download gff for BO23790.complete
Subject Subject Range Query Range Percent Splice Strand
CG15357-RA 58..402 17..363 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:18:19 Download gff for BO23790.complete
Subject Subject Range Query Range Percent Splice Strand
CG15357-RA 58..402 17..363 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:18:19 Download gff for BO23790.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1945306..1945652 17..363 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:06:57 Download gff for BO23790.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1945306..1945652 17..363 99   Minus

BO23790.pep Sequence

Translation from 16 to 379

> BO23790.pep
MTCEVQNFIDGMSQTFCKHKEMRKCQMLEILDKVRSCDCCHKRRLNNCRM
VKSGGRKPASQGWTLYLIAACFALLLLMIIYMIHVARRYNHVRAYGSSAC
GSTLFYSYSDCDVFYASFLDH

BO23790.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG15357-PB 115 CG15357-PB 1..115 1..115 631 100 Plus
CG15357-PA 115 CG15357-PA 1..115 1..115 631 100 Plus