BO23883.complete Sequence
433 bp assembled on 2010-04-13
GenBank Submission: KX799371
> BO23883.complete
GAAGTTATCAGTCGACATGGAGGATTGGAAATCGGAGGAAATGGCAAGGA
AAAGAAACAGGAATAGGAGCAAGCAGCGCAGACGAAGGCAGAAAAGTGAG
GGAAAGCCGAAGCCACATACATCTCGAGATCAGTGGAGCAATGTGGCTCA
AATATACCAAAGCCTTTTTGAATGGCACCACAATCATGTTATGAGTCTCT
GCCCTGAGGTTAATCCGAATCTGGATCAGGACCTTGAGGATATTCCCAAG
GAAACAGGAACGTTTCACTGCCTGGACTACGTGTACGAGAGTTCTTCCGA
GGATGAGGAGATCGAACCCATTGACGAAGGCTATCTGAAGTTCCTCGAGG
TGACCATTAAGCATCAGCAGGAACTCAGGGATCGAAGAACTGCCCAAACC
ACCGACTCTTTAGATGCAAGCTTTCTAGACCAT
BO23883.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:48:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13689-RA | 402 | CG13689-PA | 1..399 | 17..415 | 1980 | 99.7 | Plus |
| CG13689-RB | 345 | CG13689-PB | 77..342 | 150..415 | 1315 | 99.6 | Plus |
| CG13689-RB | 345 | CG13689-PB | 1..79 | 17..95 | 395 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:48:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13689-RA | 683 | CG13689-RA | 59..457 | 17..415 | 1980 | 99.7 | Plus |
| CG13689-RB | 1494 | CG13689-RB | 135..400 | 150..415 | 1315 | 99.6 | Plus |
| CG13689-RB | 1494 | CG13689-RB | 59..137 | 17..95 | 395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:48:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 603074..603336 | 153..415 | 1300 | 99.6 | Plus |
| 2L | 23513712 | 2L | 602871..603006 | 17..152 | 680 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:48:40 has no hits.
BO23883.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:03 Download gff for
BO23883.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13689-RA | 59..457 | 17..417 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:30 Download gff for
BO23883.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13689-RA | 59..457 | 17..417 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:32:13 Download gff for
BO23883.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13689-RA | 59..457 | 17..417 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:32:13 Download gff for
BO23883.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 602871..603006 | 17..152 | 100 | -> | Plus |
| 2L | 603074..603336 | 153..417 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:30 Download gff for
BO23883.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 602871..603006 | 17..152 | 100 | -> | Plus |
| arm_2L | 603074..603336 | 153..417 | 98 | | Plus |
BO23883.pep Sequence
Translation from 16 to 433
> BO23883.pep
MEDWKSEEMARKRNRNRSKQRRRRQKSEGKPKPHTSRDQWSNVAQIYQSL
FEWHHNHVMSLCPEVNPNLDQDLEDIPKETGTFHCLDYVYESSSEDEEIE
PIDEGYLKFLEVTIKHQQELRDRRTAQTTDSLDASFLDH
BO23883.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13689-PA | 133 | CG13689-PA | 1..133 | 1..133 | 719 | 100 | Plus |
| CG13689-PB | 114 | CG13689-PB | 1..114 | 1..133 | 583 | 85.7 | Plus |
