BO23894.complete Sequence
499 bp assembled on 2010-04-13
GenBank Submission: KX795226
> BO23894.complete
GAAGTTATCAGTCGACATGTCGAATTTCAATCGCATTCTGATCGTCATTG
TTATCGGATTGGCACTAGTTCATTTTAGTGCTGTGGATGCCCAGGCCGGA
ACGGTGCACTGGAACAATGGAAATGCGGCCGGCGTTGGCGTCTATTCGAG
CGCCCAGTCCGGCGGGATGCATCCGCCGGGAAGTCTGAGTGGCCAGGATC
CGCAGTTCAGCTACGGATACGCCGGCATCGATTCGCGTGGTACCTACGGT
GGAGCGGGTGGCAATGGAGCCTACTACGTGAGCGGTACGGACGAGCACGG
TCGTCCCTTCTCCTACAACAACCAGGTGGGCCATCCCGGCCAGCCGGGCT
ACATGGGCGTACGGCCGGACCCCAACTACCCGGGTACCTATGGCTACCAG
AATGGCGGAGCAATCATCGGCAGCTCGGTGGGCGTCACCGTGACCATAGC
ACTTGGATTGGCCTTGGGCGGCATGAGATTTGCAAGCTTTCTAGACCAT
BO23894.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:18:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12655-RA | 468 | CG12655-PA | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:18:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12655-RA | 611 | CG12655-RA | 35..501 | 15..481 | 2335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:18:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19958503..19958915 | 481..69 | 2005 | 99 | Minus |
| X | 23542271 | X | 21156367..21156618 | 481..230 | 1065 | 94.8 | Minus |
| X | 23542271 | X | 19910279..19910518 | 481..230 | 985 | 93.7 | Minus |
| X | 23542271 | X | 19915443..19915682 | 481..230 | 985 | 93.7 | Minus |
| X | 23542271 | X | 19939154..19939393 | 481..230 | 925 | 92.1 | Minus |
| X | 23542271 | X | 19929338..19929577 | 481..230 | 910 | 91.7 | Minus |
| X | 23542271 | X | 19920597..19920732 | 481..346 | 680 | 100 | Minus |
| X | 23542271 | X | 19934454..19934589 | 481..346 | 680 | 100 | Minus |
| X | 23542271 | X | 19944306..19944441 | 481..346 | 680 | 100 | Minus |
| X | 23542271 | X | 19949036..19949171 | 481..346 | 680 | 100 | Minus |
| X | 23542271 | X | 19953771..19953906 | 481..346 | 680 | 100 | Minus |
| 3R | 32079331 | 3R | 6701328..6701436 | 435..327 | 470 | 95.4 | Minus |
| X | 23542271 | X | 19959301..19959369 | 83..15 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:18:42 has no hits.
BO23894.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:35 Download gff for
BO23894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12655-RA | 22..486 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:07:03 Download gff for
BO23894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12655-RA | 37..501 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:18:30 Download gff for
BO23894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12655-RA | 37..501 | 17..483 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:18:30 Download gff for
BO23894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19959301..19959367 | 17..83 | 100 | | Minus |
| X | 19958500..19958900 | 84..483 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:07:03 Download gff for
BO23894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19852533..19852933 | 84..483 | 99 | <- | Minus |
| arm_X | 19853334..19853400 | 17..83 | 100 | | Minus |
BO23894.pep Sequence
Translation from 16 to 499
> BO23894.pep
MSNFNRILIVIVIGLALVHFSAVDAQAGTVHWNNGNAAGVGVYSSAQSGG
MHPPGSLSGQDPQFSYGYAGIDSRGTYGGAGGNGAYYVSGTDEHGRPFSY
NNQVGHPGQPGYMGVRPDPNYPGTYGYQNGGAIIGSSVGVTVTIALGLAL
GGMRFASFLDH
BO23894.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:17:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12655-PA | 155 | CG12655-PA | 1..155 | 1..155 | 834 | 100 | Plus |
