BO23916.complete Sequence
991 bp assembled on 2010-04-15
GenBank Submission: KX796225
> BO23916.complete
GAAGTTATCAGTCGACATGTCCCAGATGGGCGGCACATGCTTGTACGATG
AGCCCGAAATCATGGAGGAGTTCATCAGCTGTTATCAGTATTTCACCGCC
CTGTGGGACAGCAGCAGTCCCGATTATCTATCGAAACAGAAAAAGGAGCC
CGGCTATCAGGAGCTATTGAAGATACTGCGACGCGTTAATAGCAACTGTT
CGATTCAGGATGTTAAGCGAAAGATAAACTCGCTGCGTTGCTGCTATCGT
CGTGAATTCAAAAAGGTACAGGAATCGGTCAATGGCTACCAGACGCGTCT
CTGGTGGTTTCATCTGATGGATTTCCTCAAGCCGGTACTCAACATACAAT
CGCCGGCCAGGGTGAAATCCGAGAACGTGGACGATAGTCTCGACGAGACC
AGCATTCAGGATGTTGACATTATGTCTGATGCCTTTCCACACGAAGAGGA
TATGCTACGTCTTGATGCCGTGGGTGATGGCGATGTTGAACCGGAACCCG
AGCCTGATAACGATCCCGAATTGGATAACATGGATGATCATGTTGATGAT
TATCGTAACAATTCATCGGCTGGGAGCATTAAGAACAATGGCTATCAGCA
GCACACCGTATCTTCGCACCAGCAGCATAACGGTGAATCGCAGACTTCGG
ATAAATCCGGACGTCGCATCCGTAACCGACGAAGACGCAGTAGCAATGAC
ACCGATTACGTTGAAGCGGCGAGAAAGCGTAGAAATGTGGAGACTTCGAA
TAGAGATAGAGACTGGCATAGAGAGCGGGATAGGGAGCGAGACAGAAAGC
ATGAAAGCGACAGCGAGTACGAGTGCGAGCTGATCGGAAAACGGATGGCC
AGCCACTTCCGGCGTATGCGTCCGGATCAGCGACTTTTCGCCGAACGGAT
CATCAGCGAGGTGTTGGTCTATGGCCGAATGAATCGCCTTTCGTTCGAGA
CCCAATTTAGTATGGGTCATAAAGCAAGCTTTCTAGACCAT
BO23916.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:33:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4004-RE | 960 | CG4004-PE | 1..957 | 17..973 | 4755 | 99.8 | Plus |
CG4004-RD | 960 | CG4004-PD | 1..957 | 17..973 | 4755 | 99.8 | Plus |
CG4004-RA | 960 | CG4004-PA | 1..957 | 17..973 | 4755 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:33:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4004-RE | 2237 | CG4004-RE | 346..1302 | 17..973 | 4755 | 99.8 | Plus |
CG4004-RD | 1985 | CG4004-RD | 94..1050 | 17..973 | 4755 | 99.8 | Plus |
CG4004-RA | 3403 | CG4004-RA | 94..1050 | 17..973 | 4755 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:33:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12746864..12747432 | 405..973 | 2815 | 99.6 | Plus |
X | 23542271 | X | 12744557..12744950 | 17..410 | 1970 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:33:04 has no hits.
BO23916.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:58 Download gff for
BO23916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4004-RA | 92..1048 | 17..975 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:23:06 Download gff for
BO23916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4004-RA | 94..1050 | 17..975 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:00:33 Download gff for
BO23916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4004-RA | 94..1050 | 17..975 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:00:33 Download gff for
BO23916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12744557..12744949 | 17..409 | 100 | -> | Plus |
X | 12746869..12747432 | 410..975 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:23:06 Download gff for
BO23916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 12638590..12638982 | 17..409 | 100 | -> | Plus |
arm_X | 12640902..12641465 | 410..975 | 99 | | Plus |
BO23916.pep Sequence
Translation from 16 to 991
> BO23916.pep
MSQMGGTCLYDEPEIMEEFISCYQYFTALWDSSSPDYLSKQKKEPGYQEL
LKILRRVNSNCSIQDVKRKINSLRCCYRREFKKVQESVNGYQTRLWWFHL
MDFLKPVLNIQSPARVKSENVDDSLDETSIQDVDIMSDAFPHEEDMLRLD
AVGDGDVEPEPEPDNDPELDNMDDHVDDYRNNSSAGSIKNNGYQQHTVSS
HQQHNGESQTSDKSGRRIRNRRRRSSNDTDYVEAARKRRNVETSNRDRDW
HRERDRERDRKHESDSEYECELIGKRMASHFRRMRPDQRLFAERIISEVL
VYGRMNRLSFETQFSMGHKASFLDH
BO23916.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:11:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4004-PE | 319 | CG4004-PE | 1..319 | 1..319 | 1702 | 100 | Plus |
CG4004-PD | 319 | CG4004-PD | 1..319 | 1..319 | 1702 | 100 | Plus |
CG4004-PA | 319 | CG4004-PA | 1..319 | 1..319 | 1702 | 100 | Plus |
CG4004-PB | 339 | CG4004-PB | 4..339 | 29..319 | 1123 | 67.6 | Plus |
CG4004-PC | 304 | CG4004-PC | 115..304 | 130..319 | 1003 | 98.9 | Plus |