BO23917.complete Sequence
892 bp assembled on 2010-04-15
GenBank Submission: KX799499
> BO23917.complete
GAAGTTATCAGTCGACATGGCACACCTGCGGGAGACCTCGGACAAGGCGC
TGAAGCTGTTGCGTACTTTACCGCGCGTTCAAATCGGCAATCTGCGACCA
AATCCAAACTCAAAACAGAATGACAAGCGCGGCAGGGCACAACACGGAGG
AGATAAGCACGGAGCGGGCAACAAGGGATCCGGTCAGCGGCAGAACTTCA
TGCGATTGGGCTATGAAACGGGCAATCAGCCCTTCTACTTGAGATTTCCC
TACGAGCCCTACTACAAGGGACACCACCTAAAGCGCCAGTATCCGCCCAT
TTCGCTGCTCCAACTGCAAGTGCTCATCGACACGAACCGCATAGACATCA
GCCAGCCCATCGACATCAGCACGCTGTGTAACTCTGGCCTCCTGAAACTG
AAACCCGCTGAAATGGAGTACGGTTTCCAGCTGACGGACGATGGGCTGGA
CAATTTCCAGGCTAAGATCAACATTGAGGTGCAGCACGCCAGCGAGGCGG
TCATAGCGGCCATAGAGAAGAACGGCGGTGTAATCCGTACGGCCTATTAC
GATCCACGCAGCCTTCACATGCTGGCCAATCCGAAGAAGTGGTTCGAAAA
GGGAGTACCTATTCCTAGCCGCATGCTGCCGCCCCAGGATGCAGTGGACT
ACTATACGGATCCCAAGAATCGCGGCTACCTGGCCAATCCCGAGGCGATC
AGCCAGGACCGCCTAGTTCTGGCCCAGAAGTACGGCTATCAGCTGCCCAA
AATTGAGGAAGATTCCGCGTACGAGATGCTCACCACAGCGAAGGATCCAA
GGCAAGTATTCTACGGCCTGGAACCCGGCTGGCTGATCAACATAGTGGAC
AAAACGATCATTAAGCGCAAGCAAGCAAGCTTTCTAGACCAT
BO23917.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:47:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL15-RA | 861 | CG5219-PA | 1..858 | 17..874 | 4290 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:47:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL15-RA | 1029 | CG5219-RA | 120..977 | 17..874 | 4290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:47:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20435162..20435914 | 874..122 | 3765 | 100 | Minus |
3L | 28110227 | 3L | 20435985..20436090 | 122..17 | 530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:47:18 has no hits.
BO23917.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:59 Download gff for
BO23917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL15-RA | 82..939 | 17..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:22:47 Download gff for
BO23917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL15-RA | 120..977 | 17..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:57 Download gff for
BO23917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL15-RA | 120..977 | 17..876 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:57 Download gff for
BO23917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20435160..20435914 | 122..876 | 99 | <- | Minus |
3L | 20435986..20436090 | 17..121 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:22:47 Download gff for
BO23917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20428260..20429014 | 122..876 | 99 | <- | Minus |
arm_3L | 20429086..20429190 | 17..121 | 100 | | Minus |
BO23917.pep Sequence
Translation from 16 to 892
> BO23917.pep
MAHLRETSDKALKLLRTLPRVQIGNLRPNPNSKQNDKRGRAQHGGDKHGA
GNKGSGQRQNFMRLGYETGNQPFYLRFPYEPYYKGHHLKRQYPPISLLQL
QVLIDTNRIDISQPIDISTLCNSGLLKLKPAEMEYGFQLTDDGLDNFQAK
INIEVQHASEAVIAAIEKNGGVIRTAYYDPRSLHMLANPKKWFEKGVPIP
SRMLPPQDAVDYYTDPKNRGYLANPEAISQDRLVLAQKYGYQLPKIEEDS
AYEMLTTAKDPRQVFYGLEPGWLINIVDKTIIKRKQASFLDH
BO23917.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:19:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL15-PA | 286 | CG5219-PA | 1..286 | 1..286 | 1514 | 100 | Plus |