BO23919.complete Sequence
1084 bp assembled on 2010-07-02
GenBank Submission: KX798839
> BO23919.complete
GAAGTTATCAGTCGACATGCAGTTTGTGGCCAGTGAGCACCCGCACCGAC
GTCTAAATCCGTTGAACGGCCAATGGGTCCTAGTGTGCCCACATCGCACC
CAACGCCCTTGGTCGGGTCAGCAGGAGAAGGCGCAGAAGAACGAGCTGCC
CGAATTCGATCCCACCAATCCTCTGTGCCCTGGCGTCACCAGACCCAATG
GAATCCAAACTCCGGAATATGAGAGCACCTATGTGTTTGAGAACGACTTC
CCGGCCCTGGTGGAGGTGGTGCCCGTTCCGCCCAACAACGATGATCCACT
GTTCCAGATAGCTCCCGCCCGTGGCAACTGCCGAGTGATGTGCTTCCATC
CCAAATCGAATCTGACTTTGCCCACGATGAGTGCAGCGGAAATCGTCGTT
GTTATCGACGAGTGGATCAGCCAGTTCAACGAGCTTAGCGCCAAGTACGC
GTGGGTGCAGATATTCGAGAACAAGGGAGCCGCCATGGGGTGTTCCAATC
CCCATCCGCACTGCCAGATCTGGTCATGCTCGTTTCTGCCGACGGAACCG
CAACTGAAGCAGGAGCGTCTGCGTGCCTACTACGCCACCAACGAGCGGCC
CATGCTGGCCGACTATGTGGAGCGTGAGCTGCAGCGCCAGGAGCGGATTG
TCATTGAGAATCGCGACTGGTTGGTGGTGGTGCCCTTCTGGGCCACTTGG
CCCTTCGAAACCATGCTCATCTCACGCAACAACAATAAGCGGATCAATGA
TCTTACCGCAGAACAGCGATACAACTTGGCGCTGACCATAAAGGAGCTGA
CCACCAAGTATGACAATCTGTTCCAGTGTTCATTCCCCTACTCGATGGGT
TGGCATGGAGCACCGACTGGGCCGGAGCATGCCCACGCATCCAGTGCTCA
TTGGACCCTGCACGCCATCTACTATCCGCCGCTGCTTCGTTCTGCCTCCG
TGCGCAAGTTCATGGTGGGATTTGAGCTGCTGGCCATGGCCCAGCGGGAT
CTGACTCCCGAACAGGCAGCCCAAAGGTTGCGGGAGGTCGATGGAAAGTG
TCATTATCTAGAGAAGGCAAGCTTTCTAGACCAT
BO23919.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:24:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galt-RB | 1053 | CG9232-PB | 1..1050 | 17..1066 | 5250 | 100 | Plus |
| Galt-RA | 1053 | CG9232-PA | 1..1050 | 17..1066 | 5250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:24:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galt-RB | 1459 | CG9232-RB | 345..1394 | 17..1066 | 5250 | 100 | Plus |
| Galt-RA | 1484 | CG9232-RA | 345..1394 | 17..1066 | 5250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:24:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6666354..6667008 | 1066..412 | 3275 | 100 | Minus |
| 2L | 23513712 | 2L | 6667084..6667291 | 413..206 | 1040 | 100 | Minus |
| 2L | 23513712 | 2L | 6667361..6667531 | 205..35 | 855 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:24:17 has no hits.
BO23919.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:34:52 Download gff for
BO23919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9232-RA | 343..1392 | 17..1068 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:34 Download gff for
BO23919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galt-RA | 345..1394 | 17..1068 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:33 Download gff for
BO23919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galt-RA | 345..1394 | 17..1068 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:33 Download gff for
BO23919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6667361..6667530 | 36..205 | 100 | <- | Minus |
| 2L | 6667671..6667689 | 17..35 | 100 | | Minus |
| 2L | 6666351..6667008 | 412..1068 | 99 | <- | Minus |
| 2L | 6667086..6667291 | 206..411 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:34 Download gff for
BO23919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6666351..6667008 | 412..1068 | 99 | <- | Minus |
| arm_2L | 6667086..6667291 | 206..411 | 100 | <- | Minus |
| arm_2L | 6667361..6667530 | 36..205 | 100 | <- | Minus |
| arm_2L | 6667671..6667689 | 17..35 | 100 | | Minus |
BO23919.pep Sequence
Translation from 16 to 1084
> BO23919.pep
MQFVASEHPHRRLNPLNGQWVLVCPHRTQRPWSGQQEKAQKNELPEFDPT
NPLCPGVTRPNGIQTPEYESTYVFENDFPALVEVVPVPPNNDDPLFQIAP
ARGNCRVMCFHPKSNLTLPTMSAAEIVVVIDEWISQFNELSAKYAWVQIF
ENKGAAMGCSNPHPHCQIWSCSFLPTEPQLKQERLRAYYATNERPMLADY
VERELQRQERIVIENRDWLVVVPFWATWPFETMLISRNNNKRINDLTAEQ
RYNLALTIKELTTKYDNLFQCSFPYSMGWHGAPTGPEHAHASSAHWTLHA
IYYPPLLRSASVRKFMVGFELLAMAQRDLTPEQAAQRLREVDGKCHYLEK
ASFLDH
BO23919.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:36:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galt-PB | 350 | CG9232-PB | 1..350 | 1..350 | 1918 | 100 | Plus |
| Galt-PA | 350 | CG9232-PA | 1..350 | 1..350 | 1918 | 100 | Plus |
