BO23935.complete Sequence
928 bp assembled on 2010-04-15
GenBank Submission: KX797815
> BO23935.complete
GAAGTTATCAGTCGACATGCTGCGAAAACAAGCCAGACAGCGAAGGGAAT
ACCTGTACAATAAAGCGCTCACTGAGCGCCTCAAGTCCAAACAAAAAATC
CAGGAGACCGTTGTGAAAAGCATTAATGAAAACAAAGCAATTGGCTCCAA
AAATGTGAAGAAAAGTCTCACCGCCTACAAGTCGCTGAAATACGCGGATG
AGGGTGTCGATGACCGCACTGTCAATGATGAGTATCACTATGCCGGATGC
GAGGATCCGAAAATAATGCTGACCACCTCGCACAACCCTTCGTCGAGATT
GAAAATGTTCATGAAGGAACTGCGGCTGATTATCCCAAATGCGCAGCAGA
TGAACAGAGGAAACTACCAGCTGACTACACTAATGCACGCCTGTCGTGCC
AATAATGTAACCGATTTCCTAATTGTCCATGAGCATCGTGGCATCCCGGA
CAGCCTTGTGGTCTGTCATCTTCCGTACGGGCCAACTGCCTTCTTCAACA
TATCCGATGTGGTTATGCGACATGATATACCCGACATTGGACACATGAGC
GAGCAGAAGCCACACTTAATTTTTAATAACTTTAAAACGCCCATTGGCCT
GAGAACTGTTAAGATACTCAAACACTTGTTCCCAGTGCCCAAGGAGAACT
CCCAAAGAGTTATGTCTTTCCTAAACCACAATGACTCGATTATATTCAGA
CATCATCAGTACAAATATGTGAACAAGGAGTTGGAGCTTACCGAAGTGGG
CCCCAGATTCTCACTGAAGCTGTACCAAATTAAGCTCGGCACTTTGGAGA
ACATCAAGGCAGCTGACACGGAATGGATTAACCGACCTTATATGAATACC
TCGCAGAAGAGGCTCATATTTTCTAACGATCCGGGCATAATAAATAAGGA
CACCGAGGCTGCAAGCTTTCTAGACCAT
BO23935.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:59:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11920-RA | 897 | CG11920-PA | 1..894 | 17..910 | 4470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:00:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11920-RA | 1012 | CG11920-RA | 61..954 | 17..910 | 4470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:59:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25075617..25076324 | 203..910 | 3540 | 100 | Plus |
| 3R | 32079331 | 3R | 25074937..25075125 | 17..205 | 945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:59:58 has no hits.
BO23935.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:25:04 Download gff for
BO23935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11920-RA | 56..949 | 17..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:37:46 Download gff for
BO23935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11920-RA | 61..954 | 17..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:31:39 Download gff for
BO23935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11920-RA | 61..954 | 17..912 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:31:39 Download gff for
BO23935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25074937..25075123 | 17..203 | 100 | -> | Plus |
| 3R | 25075618..25076324 | 204..912 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:37:46 Download gff for
BO23935.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20900659..20900845 | 17..203 | 100 | -> | Plus |
| arm_3R | 20901340..20902046 | 204..912 | 99 | | Plus |
BO23935.pep Sequence
Translation from 16 to 928
> BO23935.pep
MLRKQARQRREYLYNKALTERLKSKQKIQETVVKSINENKAIGSKNVKKS
LTAYKSLKYADEGVDDRTVNDEYHYAGCEDPKIMLTTSHNPSSRLKMFMK
ELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLIVHEHRGIPDSLVVC
HLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLRTVKI
LKHLFPVPKENSQRVMSFLNHNDSIIFRHHQYKYVNKELELTEVGPRFSL
KLYQIKLGTLENIKAADTEWINRPYMNTSQKRLIFSNDPGIINKDTEAAS
FLDH
BO23935.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:11:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11920-PA | 298 | CG11920-PA | 1..298 | 1..298 | 1563 | 100 | Plus |
| CG6712-PA | 394 | CG6712-PA | 106..391 | 7..282 | 335 | 32.3 | Plus |
