BO23942.complete Sequence
1465 bp assembled on 2010-04-15
GenBank Submission: KX798313
> BO23942.complete
GAAGTTATCAGTCGACATGATTCGAAAGGTGCCGCTAATTGTAGTCCTGG
GCTCCACGGGCACCGGAAAGACGAAACTGTCTTTGCAACTGGCCGAACGC
TTCGGAGGAGAAATAATCAGCGCTGACTCCATGCAGGTTTACACCCACCT
GGACATCGCCACCGCCAAGGCAACCAAGGAGGAGCAGTCCCGGGCACGAC
ATCATCTACTGGACGTGGCCACACCGGCCGAACCCTTCACAGTCACTCAC
TTTCGTAACGCAGCACTGCCCATTGTGGAGCGCCTGCTCGCCAAGGACAC
TTCTCCGATTGTGGTGGGCGGCACGAATTACTACATAGAATCCCTACTTT
GGGATATTCTGGTTGACTCGGATGTCAAGCCGGACGAAGGCAAACATTCG
GGGGAGCATCTTAAGGATGCCGAACTGAATGCTTTGTCCACCCTCGAGCT
GCATCAGCACCTTGCCAAGATCGACGCAGGTAGTGCCAACCGTATTCACC
CCAACAACCGGCGCAAGATCATCCGGGCTATCGAAGTGTATCAGAGCACC
GGGCAGACTTTGAGCCAGATGCTGGCGGAACAGCGGGCACAGCCGGGAGG
AAACCGCCTGGGTGGACCCCTTCGCTATCCACACATCGTTCTCCTTTGGT
TGCGTTGCCAGCAGGATGTTCTAAACGAGCGATTGGATTCCCGCGTAGAT
GGCATGCTGGCCCAAGGGCTGCTCCCTGAACTACGACAGTTTCACAATGC
CCACCATGCTACCACTGTGCAAGCCTATACGTCGGGAGTTCTGCAGACGA
TTGGCTACAAGGAGTTTATTCCCTATCTGATCAAGTACGACCAGCAGCAG
GACGAAAAGATAGAGGAGTACCTCAAAACCCATAGTTACAAGCTGCCAGG
CCCAGAAAAACTGAAAGAAGAAGGTCTTCCAGATGGCTTGGAACTCCTAC
GCAATTGTTGCGAAGAACTAAAGTTAGTCACTCGCCGATACTCAAAGAAG
CAGCTGAAGTGGATCAACAATCGATTCCTGGCCAGCAAAGATCGTCAAGT
GCCGGATCTCTACGAACTGGACACCAGTGATGTGTCAGCTTGGCAGGTGG
CAGTCTACAAGCGGGCAGAGACCATCATAGAAAGCTATCGAAACGAAGAG
GCTTGCGAGATACTACCAATGGCCAAGCGGGAGCATCCTGGAGCGGATTT
GGATGAGGAGACTAGCCATTTTTGTCAAATATGCGAACGGCATTTCGTTG
GGGAGTACCAATGGGGACTGCATATGAAGTCCAACAAACACAAGCGAAGA
AAGGAGGGACAGCGCAAGCGGCAAAGGGATCACGAAACAATGCTCTCAAC
GGATCTAGCGAAGAAGCAAAAGGAGGAGAAAGAGGAGGCAGGAAAGGCGG
AGACTCAGCCACCACCCAGCCGAGTCAATGATACTGATAAGGCAATGGCA
AGCTTTCTAGACCAT
BO23942.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:17:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31381-RB | 1434 | CG31381-PB | 1..1431 | 17..1447 | 7155 | 100 | Plus |
| CG31381-RA | 1434 | CG31381-PA | 1..1431 | 17..1447 | 7155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:17:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31381-RB | 1680 | CG31381-RB | 198..1635 | 10..1447 | 7160 | 99.9 | Plus |
| CG31381-RA | 1699 | CG31381-RA | 217..1654 | 10..1447 | 7160 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:17:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24877345..24878782 | 10..1447 | 7160 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:17:01 has no hits.
BO23942.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:38 Download gff for
BO23942.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31381-RA | 132..1562 | 17..1449 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:49 Download gff for
BO23942.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31381-RB | 205..1635 | 17..1449 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:14 Download gff for
BO23942.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31381-RA | 224..1654 | 17..1449 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:14 Download gff for
BO23942.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24877352..24878782 | 17..1449 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:49 Download gff for
BO23942.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20703074..20704504 | 17..1449 | 99 | | Plus |
BO23942.pep Sequence
Translation from 16 to 1465
> BO23942.pep
MIRKVPLIVVLGSTGTGKTKLSLQLAERFGGEIISADSMQVYTHLDIATA
KATKEEQSRARHHLLDVATPAEPFTVTHFRNAALPIVERLLAKDTSPIVV
GGTNYYIESLLWDILVDSDVKPDEGKHSGEHLKDAELNALSTLELHQHLA
KIDAGSANRIHPNNRRKIIRAIEVYQSTGQTLSQMLAEQRAQPGGNRLGG
PLRYPHIVLLWLRCQQDVLNERLDSRVDGMLAQGLLPELRQFHNAHHATT
VQAYTSGVLQTIGYKEFIPYLIKYDQQQDEKIEEYLKTHSYKLPGPEKLK
EEGLPDGLELLRNCCEELKLVTRRYSKKQLKWINNRFLASKDRQVPDLYE
LDTSDVSAWQVAVYKRAETIIESYRNEEACEILPMAKREHPGADLDEETS
HFCQICERHFVGEYQWGLHMKSNKHKRRKEGQRKRQRDHETMLSTDLAKK
QKEEKEEAGKAETQPPPSRVNDTDKAMASFLDH
BO23942.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:11:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31381-PB | 477 | CG31381-PB | 1..477 | 1..477 | 2489 | 100 | Plus |
| CG31381-PA | 477 | CG31381-PA | 1..477 | 1..477 | 2489 | 100 | Plus |
