BO23945.complete Sequence
754 bp assembled on 2010-04-15
GenBank Submission: KX796017
> BO23945.complete
GAAGTTATCAGTCGACATGGCCGAATTCTCAGTGGAACGCGTCGAGGACA
AGCGAACGGTGAACGGACGAACGGAATACTATCTAAAGTGGAAGGGCTAT
CCGCGCAGCGAAAACACCTGGGAGCCGGTGGAGAATCTCGACTGTCCAGA
CCTGATAGCCAACTTCGAGGAGTCGCTGAAGAACAACAAGAAGGAGACAA
AGAAACGCCTGTCCACCTCCTCCACACCCGAATCCATACGCAGCAAACGC
AAGAGCTTCCTGGAGGACGATACCGAGGAGCAGAAGAAGCTGATCGGCTT
CGAGCGCGGTCTGGAGGCATCAAAAATACTGGGCGCCACCGACTCATCCG
GGCACCTAATGTTCCTCATGAAGTGGAAGGGCAGCGATCACGCCGACCTT
GTGCCCGCCAAGCTGGCCAACACTCGATGCCCCCAGGTGGTCATACAGTT
CTATGAGGAGCGCCTCACCTGGCACACGGGCAGCGGCAATGGTAATGGGA
ATACGAATTCCGTCAATTTGGGATCATCCGGTGGCCTGGGCTCCGTCGGC
GGCAGTGGGGCTGGCGATGATACTGCTCCCGGCAGCGTTGGCACCACCGG
TGGCGGCAGCAATATAGATGGCGGTGACGAGGAGGATCCCGAACCGGCTA
GCCCCATTGGCAGCATCAATCAAGACGAGAATATCAAGCCGGACGAGAGT
AGTGAGCTGGACAACGGACAGCCGGATGCGGATGACGCAAGCTTTCTAGA
CCAT
BO23945.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:52:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HP1b-RB | 723 | CG7041-PB | 1..720 | 17..736 | 3540 | 99.4 | Plus |
HP1b-RC | 723 | CG7041-PC | 1..720 | 17..736 | 3540 | 99.4 | Plus |
HP1b-RA | 723 | CG7041-PA | 1..720 | 17..736 | 3540 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:52:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HP1b-RB | 1105 | CG7041-RB | 106..825 | 17..736 | 3540 | 99.4 | Plus |
HP1b-RC | 1493 | CG7041-RC | 106..825 | 17..736 | 3540 | 99.4 | Plus |
HP1b-RA | 1210 | CG7041-RA | 211..930 | 17..736 | 3540 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:52:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9081359..9082078 | 17..736 | 3540 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:52:17 has no hits.
BO23945.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:39 Download gff for
BO23945.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HP1b-RA | 211..930 | 17..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:34:22 Download gff for
BO23945.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HP1b-RA | 211..930 | 17..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:28:24 Download gff for
BO23945.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HP1b-RA | 211..930 | 17..738 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:28:24 Download gff for
BO23945.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9081359..9082078 | 17..738 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:34:22 Download gff for
BO23945.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8975392..8976111 | 17..738 | 99 | | Plus |
BO23945.pep Sequence
Translation from 16 to 754
> BO23945.pep
MAEFSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANF
EESLKNNKKETKKRLSTSSTPESIRSKRKSFLEDDTEEQKKLIGFERGLE
ASKILGATDSSGHLMFLMKWKGSDHADLVPAKLANTRCPQVVIQFYEERL
TWHTGSGNGNGNTNSVNLGSSGGLGSVGGSGAGDDTAPGSVGTTGGGSNI
DGGDEEDPEPASPIGSINQDENIKPDESSELDNGQPDADDASFLDH
BO23945.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:18:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HP1b-PB | 240 | CG7041-PB | 1..240 | 1..240 | 1270 | 100 | Plus |
HP1b-PC | 240 | CG7041-PC | 1..240 | 1..240 | 1270 | 100 | Plus |
HP1b-PA | 240 | CG7041-PA | 1..240 | 1..240 | 1270 | 100 | Plus |
Su(var)205-PB | 206 | CG8409-PB | 23..202 | 3..154 | 395 | 44.4 | Plus |
Su(var)205-PA | 206 | CG8409-PA | 23..202 | 3..154 | 395 | 44.4 | Plus |