BO23946.complete Sequence
766 bp assembled on 2010-04-15
GenBank Submission: KX799124
> BO23946.complete
GAAGTTATCAGTCGACATGAGCCGCAACTACAAGGAAGATCAGACCAACG
AGGTCGAGGCGTTGGACTCCATATACTGTGGCGATATGGAGATTCTCGCC
ACGGAGCCGCACCACAAATTCCAGATTCCAATTGCCACGGAGGAGTACAG
TTCGGAGGAGCCCGAGAAAGGTCTTGCCTGCAAACTGGTCTTCACATTCA
CAGCTACCTATCCGGATGGAGCACCCGTGGTGGAAATCGAGGAGCCAGAA
AACTTTGAGGACATGTTTGAAACGCGCCTCCTGGAACACCTGCAAAAGAC
AATTGAGGAGAACCTGGGCATGGAGATGATCTTTTCGCTGGTAAGCAGCG
CCCAGGAGTGGCTGAACGAGCGGTGGGATGAACACAAGTTCCACCAGGAG
GAACTGCGAGAGCAGAAGCTGCGGGAAATCGAAGAGGAGGAACGCAAGAA
GTTTGAGGGCACCCGTGTGACGGTGGAGTCCTTCCTCAAATGGAAGCTCG
AATTCGAGGAGAGCACCGGCATTGCCGCCAAGCGGGAGAAGAACAATGTG
TCCAAGAAGCAGACCGGACGCGAACTCTTTATGTGCGACAACACGCTCAA
CGATTCGGATATCAAGTTCCTCCTGGAGGCGGGTGAAAACATTGAAAATG
TCAAAATCGATGAGACGCTGTTCCAGGATATTGGCGAATTGGATTTGGAT
GACGATGATGATGAGGATTGGGTGCCCGGGGCGGACGACGACGACGATGC
AAGCTTTCTAGACCAT
BO23946.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:21:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5515-RD | 735 | CG5515-PD | 1..732 | 17..748 | 3660 | 100 | Plus |
CG5515-RC | 735 | CG5515-PC | 1..732 | 17..748 | 3660 | 100 | Plus |
CG5515-RB | 735 | CG5515-PB | 1..732 | 17..748 | 3660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:21:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5515-RD | 922 | CG5515-RD | 109..840 | 17..748 | 3660 | 100 | Plus |
CG5515-RC | 982 | CG5515-RC | 169..900 | 17..748 | 3660 | 100 | Plus |
CG5515-RB | 1057 | CG5515-RB | 244..975 | 17..748 | 3660 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:21:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24187806..24188461 | 748..93 | 3280 | 100 | Minus |
3R | 32079331 | 3R | 24188516..24188591 | 92..17 | 380 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 08:21:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 367..430 | 381..444 | 122 | 65.6 | Plus |
BO23946.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:40 Download gff for
BO23946.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5515-RB | 222..953 | 17..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:09:54 Download gff for
BO23946.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5515-RA | 306..1037 | 17..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:16:40 Download gff for
BO23946.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5515-RB | 244..975 | 17..750 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:16:40 Download gff for
BO23946.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24187804..24188461 | 93..750 | 99 | <- | Minus |
3R | 24188516..24188591 | 17..92 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:09:54 Download gff for
BO23946.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20013526..20014183 | 93..750 | 99 | <- | Minus |
arm_3R | 20014238..20014313 | 17..92 | 100 | | Minus |
BO23946.pep Sequence
Translation from 16 to 766
> BO23946.pep
MSRNYKEDQTNEVEALDSIYCGDMEILATEPHHKFQIPIATEEYSSEEPE
KGLACKLVFTFTATYPDGAPVVEIEEPENFEDMFETRLLEHLQKTIEENL
GMEMIFSLVSSAQEWLNERWDEHKFHQEELREQKLREIEEEERKKFEGTR
VTVESFLKWKLEFEESTGIAAKREKNNVSKKQTGRELFMCDNTLNDSDIK
FLLEAGENIENVKIDETLFQDIGELDLDDDDDEDWVPGADDDDDASFLDH
BO23946.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:11:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5515-PD | 244 | CG5515-PD | 1..244 | 1..244 | 1284 | 100 | Plus |
CG5515-PC | 244 | CG5515-PC | 1..244 | 1..244 | 1284 | 100 | Plus |
CG5515-PB | 244 | CG5515-PB | 1..244 | 1..244 | 1284 | 100 | Plus |
CG5515-PA | 244 | CG5515-PA | 1..244 | 1..244 | 1284 | 100 | Plus |
CG15605-PA | 152 | CG15605-PA | 25..152 | 2..125 | 159 | 30.2 | Plus |