BO23949.complete Sequence
475 bp assembled on 2010-04-15
GenBank Submission: KX798607
> BO23949.complete
GAAGTTATCAGTCGACATGGCCAGCACCGAGAGTCTGGATGGCAGTGCCT
TCGAGGGGGACATCTCATCCATTCCGCAAGTGGGCCATCTGACCACAGAG
CCCCAGGAGTTGGAGTGTCCAGCCTGCCAGCAGTTGCAGACTACCCACGT
GAAATCGGAGGCAGTGACCGTTCTGCAGAAGATTGCCTGCTCGCTGAATG
TGCTTCTCTGCTGTAACCCCATTCGCTGGAAGGGCCGTCATGATGTCAAT
CACTACTGCAGCTCCTGTGGCTGTTTCATTGGACGCGACATCACTCTGAG
TTGGTACAAGAGGACCCTCTTTCGGCTGCAACGGGGAGAGGTGGAGGATA
ACGGACGCTGGCAGAGATTCCGCAAGGTGGAGAAGGAGCAGCTGGACGAG
AAAAAACTTGGCAGACAGCGCAAGGCCATCGAATCGAAGCGTTCCAATGA
GAATTATGCAAGCTTTCTAGACCAT
BO23949.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:51:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30196-RA | 444 | CG30196-PA | 1..441 | 17..457 | 2145 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:51:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30196-RA | 496 | CG30196-RA | 18..463 | 12..457 | 2155 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:51:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22654838..22655082 | 457..213 | 1180 | 98.8 | Minus |
| 2R | 25286936 | 2R | 22655174..22655375 | 213..12 | 980 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:51:31 has no hits.
BO23949.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:42 Download gff for
BO23949.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30196-RA | 22..462 | 17..459 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:55:24 Download gff for
BO23949.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30196-RA | 23..463 | 17..459 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:28:03 Download gff for
BO23949.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30196-RA | 23..463 | 17..459 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:28:03 Download gff for
BO23949.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22654836..22655081 | 214..459 | 97 | <- | Minus |
| 2R | 22655174..22655370 | 17..213 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:55:24 Download gff for
BO23949.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18542341..18542586 | 214..459 | 97 | <- | Minus |
| arm_2R | 18542679..18542875 | 17..213 | 99 | | Minus |
BO23949.pep Sequence
Translation from 16 to 475
> BO23949.pep
MASTESLDGSAFEGDISSIPQVGHLTTEPQELECPACQQLQTTHVKSEAV
TVLQKIACSLNVLLCCNPIRWKGRHDVNHYCSSCGCFIGRDITLSWYKRT
LFRLQRGEVEDNGRWQRFRKVEKEQLDEKKLGRQRKAIESKRSNENYASF
LDH
BO23949.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:18:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30196-PA | 147 | CG30196-PA | 1..147 | 1..147 | 790 | 100 | Plus |
| CG30195-PA | 153 | CG30195-PA | 13..137 | 16..145 | 203 | 34.6 | Plus |
