Clone BO24101 Report

Search the DGRC for BO24101

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:1
Vector:pDNR-Dual
Associated Gene/TranscriptCG14400-RA
Protein status:BO24101.pep: Imported from assembly
Sequenced Size:772

Clone Sequence Records

BO24101.complete Sequence

772 bp assembled on 2010-05-05

GenBank Submission: KX796075

> BO24101.complete
GAAGTTATCAGTCGACATGATTGCTACGTTGCTTTTAGTATTCCCCCTGC
TGTTTATGCCGTCTGATGCAACGTTAGGAACGCAGGTGATCAGCTATGAC
AACAAGCGGATGCTTCAGCTGATCGAGGACTTTAACGGCACCGTATCCGA
GCAGCTCTTCCTGGTGGTGTCCACGTGGGGAAAACTGAAAGCCGACTACC
CTAGAGATGTGGCTAAGATCGAGGATTTGGAGGAGACTCTGCAGCATGTG
GTGTGCCGGAAGGAGAGAAACGTGACAGTTCGTCATCACCTGCAGGGTTA
TCTCATCCGCGAACAGATCCGCGAGCATCTGGAGACCCTCAACTGCTCTG
ATCTGTTCCAGCAAGCATTGCAATCCGAGGATCATGAGCTGGGCAAGTGG
CAGTTGGCTATAGGACAGCATTCCCGTAAACTCCACTGTGTGTTTAAGCC
AGACCAACTGACAAGGATCCTGAAGGCAGTGATTCGTCGGACGTACACCC
TGGAGAGATCCACCAGGCTGGCTGCGCTTCTCTACCAGCTGTATATCGGC
AATCGAGAGTCCTATGCTGCAATGGTCGAAGCCGAGTTGATGCTTTACGA
GCGATATAAGAGTGGTGAAAAAAATAGCCAAGAATTCAGCGGATACATGG
CTAAACTCTGGCAAAGTATCCAAATTGAGGAGTTCTATCCGGGGTTGGAT
CAAAACACAAAACAACGACTTGTTGACGCAATTATAGACCTTCTGAAATT
CCTCGCAAGCTTTCTAGACCAT

BO24101.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:25:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14400-RA 741 CG14400-PA 1..738 17..754 3690 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:25:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14400-RA 905 CG14400-RA 1..738 17..754 3690 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:25:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20857154..20857895 754..13 3695 99.9 Minus
Blast to na_te.dros performed on 2014-11-28 02:25:45 has no hits.

BO24101.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:36 Download gff for BO24101.complete
Subject Subject Range Query Range Percent Splice Strand
CG14400-RA 1..738 17..756 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:11 Download gff for BO24101.complete
Subject Subject Range Query Range Percent Splice Strand
CG14400-RA 1..738 17..756 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:09 Download gff for BO24101.complete
Subject Subject Range Query Range Percent Splice Strand
CG14400-RA 1..738 17..756 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:09 Download gff for BO24101.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20857152..20857891 17..756 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:11 Download gff for BO24101.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20857152..20857891 17..756 99   Minus

BO24101.pep Sequence

Translation from 16 to 772

> BO24101.pep
MIATLLLVFPLLFMPSDATLGTQVISYDNKRMLQLIEDFNGTVSEQLFLV
VSTWGKLKADYPRDVAKIEDLEETLQHVVCRKERNVTVRHHLQGYLIREQ
IREHLETLNCSDLFQQALQSEDHELGKWQLAIGQHSRKLHCVFKPDQLTR
ILKAVIRRTYTLERSTRLAALLYQLYIGNRESYAAMVEAELMLYERYKSG
EKNSQEFSGYMAKLWQSIQIEEFYPGLDQNTKQRLVDAIIDLLKFLASFL
DH

BO24101.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14400-PA 246 CG14400-PA 1..246 1..246 1259 100 Plus