BO24105.complete Sequence
700 bp assembled on 2010-05-05
GenBank Submission: KX797189
> BO24105.complete
GAAGTTATCAGTCGACATGAGCGATGACAAAACAAAACCAACCTCAGTGC
TCCAGCATATAGAATCGGCGCTATATGTGATCAACCAGCTGTGCATAGGA
TTCGTCACCATTTGGATCAGCTGGACCTGCTTGCGCCAGGACCTCTCGGG
CATTCGCCTGCATGCCTGGCTGGTTACCTTCGGTTTTGTGTTCCTGATGG
CCGAGGGAATGATGTGCTTCTACGACGGCAGTTGGCTAACTGTGCGTTAC
TCCCGGAATTACAAGACTGCCTTTCACGTGGTCCTTCAGATCCTTGGGGG
AGGCATGGGCGTGGCCGGCTGTTTGATTCAACTAATACGTGACGATTGGT
CAATCAGCGTCACGTTACATGCCCGCCTGGGTTTCGCCGCCTTCGTCCTG
TGTCTGATCTCATTGCTGAGTGGACTGGTCGCCTTCCTGGCGAGATGCCT
GAGCAGGACCATCTCACCCTTGGTCAACAAGACCTTCCATGTGGTCCTCA
GCTTCACCGCCTTCGTGATCGCCATGATGGCGCAGTTTTACGGATACACA
CAGACTGGAATTTTCAGGGGACAAGGACAGGATTTCGTTGTCCTCATGCA
GGTCGTCACTATGGTCCTAATGGTCCTAACCAGCATTGGCGCCATTAAGT
CGCTCTACCAGAAGATTGGTAGCCTGGCCAGTGCAAGCTTTCTAGACCAT
BO24105.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:23:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13078-RA | 669 | CG13078-PA | 1..666 | 17..682 | 3330 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:23:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13078-RA | 910 | CG13078-RA | 90..755 | 17..682 | 3330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:23:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19564338..19565003 | 17..682 | 3330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:23:45 has no hits.
BO24105.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:23 Download gff for
BO24105.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13078-RA | 1..666 | 17..684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:20 Download gff for
BO24105.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13078-RA | 90..755 | 17..684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:22 Download gff for
BO24105.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13078-RA | 90..755 | 17..684 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:22 Download gff for
BO24105.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19564338..19565003 | 17..684 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:20 Download gff for
BO24105.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19564338..19565003 | 17..684 | 99 | | Plus |
BO24105.pep Sequence
Translation from 16 to 700
> BO24105.pep
MSDDKTKPTSVLQHIESALYVINQLCIGFVTIWISWTCLRQDLSGIRLHA
WLVTFGFVFLMAEGMMCFYDGSWLTVRYSRNYKTAFHVVLQILGGGMGVA
GCLIQLIRDDWSISVTLHARLGFAAFVLCLISLLSGLVAFLARCLSRTIS
PLVNKTFHVVLSFTAFVIAMMAQFYGYTQTGIFRGQGQDFVVLMQVVTMV
LMVLTSIGAIKSLYQKIGSLASASFLDH
BO24105.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13078-PA | 222 | CG13078-PA | 1..222 | 1..222 | 1139 | 100 | Plus |
| CG13077-PB | 226 | CG13077-PB | 15..223 | 12..221 | 521 | 50.2 | Plus |
| CG13077-PA | 269 | CG13077-PA | 58..266 | 12..221 | 521 | 50.2 | Plus |
| CG10165-PD | 228 | CG10165-PD | 1..216 | 1..217 | 198 | 28.4 | Plus |
| CG10165-PC | 228 | CG10165-PC | 1..216 | 1..217 | 198 | 28.4 | Plus |
