BO24107.complete Sequence
787 bp assembled on 2010-05-05
GenBank Submission: KX796205
> BO24107.complete
GAAGTTATCAGTCGACATGCAGTACTTCGTGATGTCGTACTACTTTATGG
AGGTTTTGTATTCAGTGGTCAACACACCACTTGTGGGCAGGGAAAGAGCG
ATTGTGATGGACGTGAACGAGTGCTTCGGTCACTTCTACACATGCTTTGA
TGTCCTGCTGACCATCGGCGCCATCTTTCTCATTCTCGGCACGCGAAAGG
AGGCGAGCGGAGTGACTCTGCTGCTAATCGGAAGAGTTATCCACCGGCTG
TTCTTCTCGATATGGACCATGTTCTTTTATTTCCTCTTCAACGACAGCTT
GGATGTGGGCTCCCTGCTGCTGCTAATGGCGGCCAAAATCAATTTGAGGG
ATCAGATGGACTGGTTCCAGTCGAAATATCATATTTTACTGCTGGGAGGA
AGACTCTGTCTGTCCAGTTTGTACATCATTTGGATAGACGAGGGCTTGGA
GACCCTTTTCAGCATCGTTTCATTTGGTCTTTTGGTTTTCATTTGGCTTG
GCTTTCATTGCAAACTGTTTGCCTATCTGACGGTGATTGCCCTACTATAT
CACGATGTGTTTAGCAATCATTGGAGCATGTTGTGGGGCTGGAACGATAC
TCTGCTGTCGATACAATACTTCTCCCTGCTGTTCTGCAAAATTGGCGGAT
TCCTGATGCTCTCGGAGCTAGGTGGAGGCAGGTGGTCGGTGGATGGATAC
CGGAAGAGAAGTGGCGAGAAATGGGAGAAAAAAGGCAACTACCGGATCAT
TAAGACACAGACGTCGGCCGCAAGCTTTCTAGACCAT
BO24107.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:26:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14070-RB | 756 | CG14070-PB | 1..753 | 17..769 | 3765 | 100 | Plus |
| CG14070-RA | 756 | CG14070-PA | 1..753 | 17..769 | 3765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:26:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14070-RB | 1229 | CG14070-RB | 91..843 | 17..769 | 3765 | 100 | Plus |
| CG14070-RA | 1082 | CG14070-RA | 91..843 | 17..769 | 3765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:26:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10901261..10901695 | 451..17 | 2175 | 100 | Minus |
| 2L | 23513712 | 2L | 10900887..10901206 | 769..450 | 1600 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:26:16 has no hits.
BO24107.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:40 Download gff for
BO24107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14070-RA | 71..823 | 17..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:22 Download gff for
BO24107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14070-RA | 91..843 | 17..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:19 Download gff for
BO24107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14070-RA | 91..843 | 17..771 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:19 Download gff for
BO24107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10900885..10901204 | 452..771 | 99 | <- | Minus |
| 2L | 10901261..10901695 | 17..451 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:22 Download gff for
BO24107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10900885..10901204 | 452..771 | 99 | <- | Minus |
| arm_2L | 10901261..10901695 | 17..451 | 100 | | Minus |
BO24107.pep Sequence
Translation from 16 to 787
> BO24107.pep
MQYFVMSYYFMEVLYSVVNTPLVGRERAIVMDVNECFGHFYTCFDVLLTI
GAIFLILGTRKEASGVTLLLIGRVIHRLFFSIWTMFFYFLFNDSLDVGSL
LLLMAAKINLRDQMDWFQSKYHILLLGGRLCLSSLYIIWIDEGLETLFSI
VSFGLLVFIWLGFHCKLFAYLTVIALLYHDVFSNHWSMLWGWNDTLLSIQ
YFSLLFCKIGGFLMLSELGGGRWSVDGYRKRSGEKWEKKGNYRIIKTQTS
AASFLDH
BO24107.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:05:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14070-PB | 251 | CG14070-PB | 1..251 | 1..251 | 1333 | 100 | Plus |
| CG14070-PA | 251 | CG14070-PA | 1..251 | 1..251 | 1333 | 100 | Plus |
