BO24110.complete Sequence
511 bp assembled on 2010-05-05
> BO24110.complete
GAAGTTATCAGTCGACATGCAGATAGCGGCAGCTATGTGGTGGTTTTACA
TCTCAAAGATACTGGAATTCGTAGACACGGCATTCTTCATCTTGCGCCAC
AAATGGAACCAGCTGAGCTTCCTACATGTGTACCACCATAGCACCATGTT
CTTGTTTTGCTGGACTTATGTCAAATGGCTGCCGACGGGTTCAACCTTTT
TTCCAAGCATGATAAACTCTTTTGTGCACGTGATTATGTACAGCTATTAT
GCATTGAGTGTGCTGGGTCCTCGAGTCCAGAGGTTCCTCTGGTGGAAGCG
CTACTTAACTGGCCTCCAGCTGGTCCAGTTTACCATTATCTTCTTTTGGG
CATCACAATTAGTTTTCCGGGGCTGTGAGTACGGAAAATGGTTAACGCCA
ATCGGAGCTGCCTATATGGTGCCATTTCTCTTTATGTTCGGTAGGTTCTA
TGCTCAAAAATACTGTGTTTCGGCAGTTGTAAAGAAAGCCAAGGCAAGCT
TTCTAGACCAT
BO24110.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:26:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elo68beta-RB | 810 | CG11801-PB | 336..807 | 22..493 | 2360 | 100 | Plus |
| Elo68alpha-RA | 789 | CG32072-PA | 331..650 | 38..357 | 925 | 85.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:26:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elo68beta-RB | 840 | CG11801-RB | 359..830 | 22..493 | 2360 | 100 | Plus |
| Elo68alpha-RA | 937 | CG32072-RA | 355..674 | 38..357 | 925 | 85.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:26:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11100685..11100983 | 493..195 | 1495 | 100 | Minus |
| 3L | 28110227 | 3L | 11101045..11101222 | 194..17 | 890 | 100 | Minus |
| 3L | 28110227 | 3L | 11102138..11102287 | 357..208 | 570 | 92 | Minus |
| 3L | 28110227 | 3L | 11102368..11102522 | 192..38 | 385 | 83.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:26:46 has no hits.
BO24110.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:44 Download gff for
BO24110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elo68beta-RC | 618..1094 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:35 Download gff for
BO24110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elo68beta-RB | 354..830 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:28 Download gff for
BO24110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elo68beta-RB | 354..830 | 17..495 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:28 Download gff for
BO24110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11100683..11100983 | 195..495 | 99 | <- | Minus |
| 3L | 11101045..11101222 | 17..194 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:35 Download gff for
BO24110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11093783..11094083 | 195..495 | 99 | <- | Minus |
| arm_3L | 11094145..11094322 | 17..194 | 100 | | Minus |
BO24110.pep Sequence
Translation from 16 to 511
> BO24110.pep
MQIAAAMWWFYISKILEFVDTAFFILRHKWNQLSFLHVYHHSTMFLFCWT
YVKWLPTGSTFFPSMINSFVHVIMYSYYALSVLGPRVQRFLWWKRYLTGL
QLVQFTIIFFWASQLVFRGCEYGKWLTPIGAAYMVPFLFMFGRFYAQKYC
VSAVVKKAKASFLDH
BO24110.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:05:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elo68beta-PB | 269 | CG11801-PB | 111..269 | 1..159 | 871 | 98.7 | Plus |
| Elo68alpha-PA | 262 | CG32072-PA | 104..260 | 1..157 | 711 | 79 | Plus |
| CG31523-PF | 354 | CG31523-PF | 110..262 | 1..153 | 381 | 45.8 | Plus |
| CG31523-PE | 354 | CG31523-PE | 110..262 | 1..153 | 381 | 45.8 | Plus |
| CG31523-PG | 354 | CG31523-PG | 110..262 | 1..153 | 381 | 45.8 | Plus |
