BO24114.complete Sequence
781 bp assembled on 2010-05-05
GenBank Submission: KX799226
> BO24114.complete
GAAGTTATCAGTCGACATGAACTGCAAGCTACGCCGCCTGGACCTGTTGC
GGAATGGCCAAAAGTCGGACTGCGAGCTCCATGTCTCGCAACCGGACAAG
TTGAAGGAGGGCAAGCGTTGTCCATGCATTTTCCGCTGCCACCAGGTGAT
GCTCATCTCCGCCTCCGCGGAGTTCGAGCGCCTGATCAGGGATCCCGAGT
TCCAGAAGAACAAGCGAGTGATCAGCGTGGACGACGCCTCTCCCACCGCC
TACGAGGCGTTGCTCCTCTACATCTACACGTACGAGGTGTGCAATGCGGT
GACCATCGACATGTGCGGTGACCTCATGCTGCTGGCCGAGCGCTACGAGA
TGCTGGACTTCATCGACTGCTACATCGACAAGCTGGCCCACCAGGAGTGG
CCCATGGAGGTGGTTCTGCAGGTCTTCCACCTGGCCAGCGAGCACCACCA
TCCGGCACTGATGGATCTCGTGGCGAAAAAAATCCTCCCCGTAGCCACGC
AGGTGCTCATGGACAACTCGTTCCTCAAGCTGAGTGTTAAGGAGCTAAAG
GCTCTGATGATAATCCTGAAAAAGGATGGAGATCTCTCCGATCACGAACT
GCTGACCTCGCTGAAGAACTACCAGGATGTGAACAACCTGCGCTACGAGG
ACATGGAGCAGTTCCAGCAGCTCGTTGAGGTAACCCAGTTGTTCGGTCAC
GTTCTCTTCGAAGTGGATGGCACCATAGTTGTGCCCGAAGAAGAAAAACC
TTCGCCGGAGGAAGCAAGCTTTCTAGACCAT
BO24114.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:23:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14260-RA | 750 | CG14260-PA | 1..747 | 17..763 | 3735 | 100 | Plus |
| CG14260-RB | 501 | CG14260-PB | 1..462 | 17..478 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:23:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14260-RA | 919 | CG14260-RA | 31..777 | 17..763 | 3735 | 100 | Plus |
| CG14260-RB | 903 | CG14260-RB | 31..761 | 17..763 | 3460 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:23:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27265487..27265948 | 17..478 | 2310 | 100 | Plus |
| 3R | 32079331 | 3R | 27265997..27266281 | 479..763 | 1425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:23:54 has no hits.
BO24114.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:24 Download gff for
BO24114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14260-RA | 31..777 | 17..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:25 Download gff for
BO24114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14260-RA | 31..777 | 17..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:25 Download gff for
BO24114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14260-RA | 31..777 | 17..765 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:25 Download gff for
BO24114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27265487..27265948 | 17..478 | 100 | -> | Plus |
| 3R | 27265997..27266281 | 479..765 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:25 Download gff for
BO24114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23091209..23091670 | 17..478 | 100 | -> | Plus |
| arm_3R | 23091719..23092003 | 479..765 | 99 | | Plus |
BO24114.pep Sequence
Translation from 16 to 781
> BO24114.pep
MNCKLRRLDLLRNGQKSDCELHVSQPDKLKEGKRCPCIFRCHQVMLISAS
AEFERLIRDPEFQKNKRVISVDDASPTAYEALLLYIYTYEVCNAVTIDMC
GDLMLLAERYEMLDFIDCYIDKLAHQEWPMEVVLQVFHLASEHHHPALMD
LVAKKILPVATQVLMDNSFLKLSVKELKALMIILKKDGDLSDHELLTSLK
NYQDVNNLRYEDMEQFQQLVEVTQLFGHVLFEVDGTIVVPEEEKPSPEEA
SFLDH
BO24114.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14260-PA | 249 | CG14260-PA | 1..249 | 1..249 | 1296 | 100 | Plus |
| CG14260-PB | 166 | CG14260-PB | 1..154 | 1..154 | 821 | 100 | Plus |
| CG14262-PA | 312 | CG14262-PA | 76..309 | 6..237 | 262 | 29.6 | Plus |
