BO24117.complete Sequence
538 bp assembled on 2010-05-05
GenBank Submission: KX794755
> BO24117.complete
GAAGTTATCAGTCGACATGAAGTTCTATCCGAATGCAGATGTCTGGTTCT
GTGTGGACAAGACCAGCTGCTTGAACAGCTATCAAAAGTATCCACCCACG
CACAGCTGGAAGATTCACGATCGGACCACCGCGCGGGAAATGTACTATTG
GCGCGACATCGAGGGCGTGAAGAAGACGGAGATCAAGCTTAAGGATCTGT
ACTTCACCAATTGGCCCAAAACCCGCATCCGTCCACAGGCCTGCTTGGGA
TTGCTCTATGCCACGGGCAACAGATTCATCCGACTGACCAAGGCACCACC
AGCGGGCTTCAAGTGTGCACCACTGCCCGTCAATCTGGCCACCGCTCGAA
TTGTCAAAGTGGAGCTGCGCAAGAAGGCGAAGCGCGAAAAACAGGCAGCT
AAAAAGGCTAAAAAGGAAGCGAAGAAGGCCAAGAAGGCGGGCAAAAAGGG
CAAAGGAAAGGGCGGTAATGGCGATCTTAAGCCAAAGGTCATTAGGACAT
ACGAAGACGCCGAGAAAGCAGCAAGCTTTCTAGACCAT
BO24117.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:24:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16739-RA | 507 | CG16739-PA | 1..504 | 17..520 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:24:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16739-RA | 695 | CG16739-RA | 114..618 | 16..520 | 2525 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:24:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20342106..20342449 | 16..359 | 1720 | 100 | Plus |
2R | 25286936 | 2R | 20342510..20342672 | 358..520 | 815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:24:03 has no hits.
BO24117.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:25 Download gff for
BO24117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16739-RA | 80..583 | 17..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:27 Download gff for
BO24117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16739-RA | 115..618 | 17..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:28 Download gff for
BO24117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16739-RA | 115..618 | 17..522 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:28 Download gff for
BO24117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20342107..20342449 | 17..359 | 100 | -> | Plus |
2R | 20342512..20342672 | 360..522 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:27 Download gff for
BO24117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16230017..16230177 | 360..522 | 98 | | Plus |
arm_2R | 16229612..16229954 | 17..359 | 100 | -> | Plus |
BO24117.pep Sequence
Translation from 16 to 538
> BO24117.pep
MKFYPNADVWFCVDKTSCLNSYQKYPPTHSWKIHDRTTAREMYYWRDIEG
VKKTEIKLKDLYFTNWPKTRIRPQACLGLLYATGNRFIRLTKAPPAGFKC
APLPVNLATARIVKVELRKKAKREKQAAKKAKKEAKKAKKAGKKGKGKGG
NGDLKPKVIRTYEDAEKAASFLDH
BO24117.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16739-PA | 168 | CG16739-PA | 1..168 | 1..168 | 904 | 100 | Plus |