BO24118.complete Sequence
778 bp assembled on 2010-05-05
GenBank Submission: KX796151
> BO24118.complete
GAAGTTATCAGTCGACATGTTTGTGCAGTGGATTTTCCTGGCCTTCAGCG
TCACCGTGGTTTCCTCTAATTGGATTCCGGAACGAATCGTGGGAGGCGAC
TTGATAACCATTCTATCAGTTCCCTGGCAGGCTTCCATTCTTAGGCTTGG
ACGGTTTCACTGCGGTGCAGCCATCTACAGTGAAGACATCGTCATAACGG
CAGCCCACTGCCTCACCGACCGCGAGACCGAGTTCCTCTCAGTGAGAGTC
GGCTCATCGTTCACATTCTTCGGTGGTCAGGTGGTGAGGGTATCCAGTGT
TCTGTTACACGAGGAATACGACCAGTCCTGGTCCAACGACATAGCCGTGA
TGAGGCTTCAGTCCAAGCTCCGGCTGGGAAGTGCAGTCAGTGTCATTCCC
TTGGCCGATACTCCCCCGGCCAGTGGATCACCTGCCACCGTTTCTGGATG
GGGAGCCATTGGTTTTAAGAAGAATTACCCCATGTCCATACTGTCCGCTT
CGGTGGACATTGTGGACCAGGATCAGTGTCGTAGGTCGTACGGAAGAAAA
ATCACCAAGGACATGATCTGTGCGGCCGCTCCAGGAAAGGATGCCTGCTC
CGGCGATTCGGGAGGTCCTCTGGTCTCCGGTAACAAGCTCGTTGGGATCG
TGTCCTTTGGCAAGGAGTGCGCTCATCCCGAATATCCTGGAGTCTACGCT
AACGTGGCTGAGCTGAAGCCCTGGATTTTGGGCGCTATCGAAAGAATAAC
TAAATCTGAAGCAAGCTTTCTAGACCAT
BO24118.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:24:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17239-RB | 747 | CG17239-PB | 1..744 | 17..760 | 3720 | 100 | Plus |
| CG17239-RA | 747 | CG17239-PA | 1..744 | 17..760 | 3720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:24:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17239-RB | 832 | CG17239-RB | 5..755 | 10..760 | 3725 | 99.7 | Plus |
| CG17239-RA | 770 | CG17239-RA | 5..755 | 10..760 | 3725 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:24:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2251587..2252337 | 760..10 | 3725 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:24:13 has no hits.
BO24118.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:26 Download gff for
BO24118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17239-RA | 7..744 | 23..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:32 Download gff for
BO24118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17239-RA | 18..755 | 23..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:32 Download gff for
BO24118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17239-RA | 18..755 | 23..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:32 Download gff for
BO24118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2251585..2252324 | 23..762 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:32 Download gff for
BO24118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2251585..2252324 | 23..762 | 99 | | Minus |
BO24118.pep Sequence
Translation from 16 to 778
> BO24118.pep
MFVQWIFLAFSVTVVSSNWIPERIVGGDLITILSVPWQASILRLGRFHCG
AAIYSEDIVITAAHCLTDRETEFLSVRVGSSFTFFGGQVVRVSSVLLHEE
YDQSWSNDIAVMRLQSKLRLGSAVSVIPLADTPPASGSPATVSGWGAIGF
KKNYPMSILSASVDIVDQDQCRRSYGRKITKDMICAAAPGKDACSGDSGG
PLVSGNKLVGIVSFGKECAHPEYPGVYANVAELKPWILGAIERITKSEAS
FLDH
BO24118.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17239-PB | 248 | CG17239-PB | 1..248 | 1..248 | 1286 | 100 | Plus |
| CG17239-PA | 248 | CG17239-PA | 1..248 | 1..248 | 1286 | 100 | Plus |
| Ser12-PA | 245 | CG17240-PA | 1..245 | 1..244 | 630 | 54.1 | Plus |
| alphaTry-PA | 256 | CG18444-PA | 30..256 | 23..244 | 530 | 49.8 | Plus |
| gammaTry-PA | 253 | CG30028-PA | 2..250 | 3..238 | 529 | 44.2 | Plus |
