BO24119.complete Sequence
769 bp assembled on 2010-05-05
GenBank Submission: KX797603
> BO24119.complete
GAAGTTATCAGTCGACATGCTGCTCAAAGGCATTCTTCTATTAGTTTCCA
TTGCTCAAATAGCAGCAGATTTCAAATCGATTGGCATTGAACAAGCTCCC
TGGCAGGCTTCCGTTCAAATAAACGACAAACATCACTGCGGAGGAGTGAT
ATACAGCGAAGATATCATCCTGACCATTGCCGAGTGTGTGAGAAAGGCCA
GATTGGAATTCATCTCGGTGCGAGTGGGGTCTGCCCAGGAAAACGCCGGT
GGCACTGTGCTGAAGGTCGAGAAGATGAGGCTGCAAGTACTTGGCCTGCG
TCCCAGTGATGTGGCCATACTCCAGCTGAGATCGCCGCTGTACTTGGACG
GCGGAATTCGGGCCATTCCCTTGGCCACCATACCATTAGTGCCGGGAACG
AATGCCTCCGTTTCGGGTTGGGGTCAACTCTCTGCCATGAATCCTTCGTC
GGAAGTTTTACTGAGAGTCGATGTAAAAATCCAAGATCAATTGATGTGCG
CGACAAACCTTGCTCTGAAGGGCAGACTTATGAGTGTGGGCGAGATCTGC
GCAGCACCTGCGGGAGAAATTCCCTACGCCTGTCAAGGATTCGTCGGCGG
TCCTTTGGTTGCCAATAATCGGCTGTATGGAATCCTTTCCTGGCAAAGTG
CCTGCGACGTCCTCAATAAATCTAGTGTCTATGCCAATATCGCGATGTTC
AAAGTGTGGATTGAATCCACTGTTAAGCTAATGAATTTCTTCAGAATAGG
CGCAAGCTTTCTAGACCAT
BO24119.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:24:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17242-RA | 738 | CG17242-PA | 1..735 | 17..751 | 3675 | 100 | Plus |
| CG17242-RB | 738 | CG17242-PB | 1..735 | 17..751 | 3675 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:24:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17242-RA | 842 | CG17242-RA | 48..782 | 17..751 | 3675 | 100 | Plus |
| CG17242-RB | 1035 | CG17242-RB | 48..782 | 17..751 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:24:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2268359..2269093 | 751..17 | 3675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:24:22 has no hits.
BO24119.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:27 Download gff for
BO24119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17242-RA | 1..735 | 17..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:36 Download gff for
BO24119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17242-RB | 27..761 | 17..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:35 Download gff for
BO24119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17242-RB | 48..782 | 17..753 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:35 Download gff for
BO24119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2268357..2269093 | 17..753 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:36 Download gff for
BO24119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2268357..2269093 | 17..753 | 99 | | Minus |
BO24119.pep Sequence
Translation from 16 to 769
> BO24119.pep
MLLKGILLLVSIAQIAADFKSIGIEQAPWQASVQINDKHHCGGVIYSEDI
ILTIAECVRKARLEFISVRVGSAQENAGGTVLKVEKMRLQVLGLRPSDVA
ILQLRSPLYLDGGIRAIPLATIPLVPGTNASVSGWGQLSAMNPSSEVLLR
VDVKIQDQLMCATNLALKGRLMSVGEICAAPAGEIPYACQGFVGGPLVAN
NRLYGILSWQSACDVLNKSSVYANIAMFKVWIESTVKLMNFFRIGASFLD
H
BO24119.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17242-PA | 245 | CG17242-PA | 1..245 | 1..245 | 1238 | 100 | Plus |
| CG17242-PB | 245 | CG17242-PB | 1..245 | 1..245 | 1238 | 100 | Plus |
| CG17239-PB | 248 | CG17239-PB | 1..242 | 1..237 | 355 | 36 | Plus |
| CG17239-PA | 248 | CG17239-PA | 1..242 | 1..237 | 355 | 36 | Plus |
| alphaTry-PA | 256 | CG18444-PA | 39..252 | 24..235 | 344 | 38 | Plus |
