BO24125.complete Sequence
670 bp assembled on 2010-05-05
GenBank Submission: KX798520
> BO24125.complete
GAAGTTATCAGTCGACATGGAGGATAGCGGCATCGATAGCGAGGACAGAC
AATCCAACATCTACGAGGATGGGGCTGCGGGACTCTTGAAAACGGCCAGC
GGAGCACCCAAACATATGTCAGATCTGGAGTTTGAGGTGGCATTCAGGGG
TGCCGGCAAGGTCTATGCCCCCACGACCATAGAAATCGATGAAGAGGAGG
AAGCGACCGCAGGAAGCGGTCGAGGCCACGAGCCACCCAACACCTGCCGC
ATACTGCAGCGCAAACTGGAGCTGAAGGTCGAGCGGGCCCGGCGGAACTA
CACTCAGTTTCAGGCGGAGCAGGCTACCAAGACGCAGTCGTCCACTCTGA
TACCAATCAACCGTCTACCCATTCCTGGCGAGCCGGAACACAAGCCACTG
GTGGACTACAAATCCGAGAGTAGCGACGAGGCCGAGGAGATCTCCTTCTT
TCCGGCCCAGCTGAAGCGGTCCAAGCGCCGCCAGCAGAACCACGAACTGA
CTGACACCTTCAGCATACAGGAGATGACCATTGACTCGGATCTGGAGTCG
GACGACAGTGCTGGCACCCAGAACCTCGAGCTCCTGCTGCCCTCCATGAA
GACGACCATTCTGGACAAGTTTAAGGGATGCTTCGGATGCTGGCGGCGCA
GGGCAAGCTTTCTAGACCAT
BO24125.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:24:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31051-RA | 639 | CG31051-PA | 1..636 | 17..652 | 3180 | 100 | Plus |
| CG31051-RB | 657 | CG31051-PB | 1..654 | 17..652 | 2965 | 97.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:24:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31051-RA | 835 | CG31051-RA | 89..724 | 17..652 | 3180 | 100 | Plus |
| CG31051-RB | 853 | CG31051-RB | 89..742 | 17..652 | 2965 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:24:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28519659..28519991 | 652..320 | 1665 | 100 | Minus |
| 3R | 32079331 | 3R | 28520050..28520285 | 323..88 | 1180 | 100 | Minus |
| 3R | 32079331 | 3R | 28520356..28520427 | 88..17 | 360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:24:40 has no hits.
BO24125.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:29 Download gff for
BO24125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31051-RA | 89..724 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:44 Download gff for
BO24125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31051-RA | 89..724 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:43 Download gff for
BO24125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31051-RA | 89..724 | 17..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:43 Download gff for
BO24125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28519657..28519988 | 323..654 | 99 | <- | Minus |
| 3R | 28520051..28520284 | 89..322 | 100 | <- | Minus |
| 3R | 28520356..28520427 | 17..88 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:44 Download gff for
BO24125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24345379..24345710 | 323..654 | 99 | <- | Minus |
| arm_3R | 24345773..24346006 | 89..322 | 100 | <- | Minus |
| arm_3R | 24346078..24346149 | 17..88 | 100 | | Minus |
BO24125.pep Sequence
Translation from 16 to 670
> BO24125.pep
MEDSGIDSEDRQSNIYEDGAAGLLKTASGAPKHMSDLEFEVAFRGAGKVY
APTTIEIDEEEEATAGSGRGHEPPNTCRILQRKLELKVERARRNYTQFQA
EQATKTQSSTLIPINRLPIPGEPEHKPLVDYKSESSDEAEEISFFPAQLK
RSKRRQQNHELTDTFSIQEMTIDSDLESDDSAGTQNLELLLPSMKTTILD
KFKGCFGCWRRRASFLDH
BO24125.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31051-PA | 212 | CG31051-PA | 1..212 | 1..212 | 1095 | 100 | Plus |
| CG31051-PB | 218 | CG31051-PB | 1..218 | 1..212 | 1078 | 97.2 | Plus |
