Clone BO24126 Report

Search the DGRC for BO24126

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG31229-RA
Protein status:BO24126.pep: Imported from assembly
Sequenced Size:619

Clone Sequence Records

BO24126.complete Sequence

619 bp assembled on 2010-05-05

GenBank Submission: KX795347

> BO24126.complete
GAAGTTATCAGTCGACATGTCCGTGCTGCCCAACGCCGGAAACAATGAAT
CGTCGGTGACGGCGCCCAAAATGTTTGGCGATCCGGATTTGGATCGCATG
GCGATGGAGTACGTCGGAAACATGCAGCGCTACCGCGAGAACATCATAAT
CCCCAAGAGCAACGGCCCCGTGAAGATCAAGACCAACGAGGAGAAGTTCA
TCGAAACGGCGGTGGAGAGCTGTGGATTCAAATGCACCATGGCCTGTGTG
ATGGGCTATGGCTTGGGTGCAGCTTTGGGTTTGTTTAGCGCCTCCGTTAA
TCCCAACATGGCCGATCCGTTCGCGAATGAGAAGAAGCAGACGGCCAGGG
AGGTTTTCCGCGAAATGCGCTCCACCACCCATTCCTACGCGAAGAATTTC
GCGCTCATCGGCTGTGTGTTCTCCGCCGTCGAGTGCACCATCGAGAGCCA
TCGGGGCGTCACGGACTGGAAGAATGGCACCTACGCTGGAGGCATCACTG
GAGGACTGATTGGTTTGCGGGCTGGCGTTAAGGCGGGCATCATCGGCGGC
CTGGGATTCGCCGCCTTCTCCACGGCCATCGACTACTACATGTATTCTAG
AGCAAGCTTTCTAGACCAT

BO24126.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:24:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31229-RA 588 CG31229-PA 1..585 17..601 2925 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:24:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31229-RA 777 CG31229-RA 134..718 17..601 2925 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:24:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18667985..18668223 17..255 1195 100 Plus
3R 32079331 3R 18668608..18668802 254..448 975 100 Plus
3R 32079331 3R 18668872..18669024 449..601 765 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:24:50 has no hits.

BO24126.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:30 Download gff for BO24126.complete
Subject Subject Range Query Range Percent Splice Strand
CG31229-RA 53..637 17..603 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:49 Download gff for BO24126.complete
Subject Subject Range Query Range Percent Splice Strand
CG31229-RA 113..697 17..603 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:45 Download gff for BO24126.complete
Subject Subject Range Query Range Percent Splice Strand
CG31229-RA 134..718 17..603 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:45 Download gff for BO24126.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18667985..18668222 17..254 100 -> Plus
3R 18668609..18668802 255..448 100 -> Plus
3R 18668872..18669024 449..603 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:49 Download gff for BO24126.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14493707..14493944 17..254 100 -> Plus
arm_3R 14494331..14494524 255..448 100 -> Plus
arm_3R 14494594..14494746 449..603 98   Plus

BO24126.pep Sequence

Translation from 16 to 619

> BO24126.pep
MSVLPNAGNNESSVTAPKMFGDPDLDRMAMEYVGNMQRYRENIIIPKSNG
PVKIKTNEEKFIETAVESCGFKCTMACVMGYGLGAALGLFSASVNPNMAD
PFANEKKQTAREVFREMRSTTHSYAKNFALIGCVFSAVECTIESHRGVTD
WKNGTYAGGITGGLIGLRAGVKAGIIGGLGFAAFSTAIDYYMYSRASFLD
H

BO24126.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG31229-PA 195 CG31229-PA 1..195 1..195 1021 100 Plus