Clone BO24129 Report

Search the DGRC for BO24129

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptCG31804-RA
Protein status:BO24129.pep: Imported from assembly
Sequenced Size:670

Clone Sequence Records

BO24129.complete Sequence

670 bp assembled on 2010-05-05

GenBank Submission: KX795882

> BO24129.complete
GAAGTTATCAGTCGACATGGCAGAAAAAAATAGTTCGAACGATGGACAGT
ACTTCCTTCAATCGAAACATTTTATCGATTTTAGACAGAACGAAACGGAC
ACAGTGGATTCGGCTATGGATGTAGCTACCAGGCAAAGTGCATCCACCAA
AAAGAAGATACATATCCACCAAGGACTAGGATCTAGAAAAACGTCAAAGA
ATATTAAACGGAAAATGTCGAAAGCTAGTCAAGACCTGAAAAGAACTTCT
AAAACTGCCGCGAAACCACAGAAGCAAAGGTTATCACAGAGTTTTAAAAA
AAGAAATATTCCGGAAAAAAAATTTGACAAGTTCCCGCAGGCGGGAGTTT
CCCGAAAGCAGGATGGCAAATTCCGAACCATAACTATCAAAAAGGAAGCA
CAATGTCGTCTGCGAACTGCCTTAAAATTACTGGATATCCTTGAAGGGAA
ATATGATGACAGTGATAGAGAATGTTCGTTGGATTCTAAATCCTTACATG
GTTCAGTAAAAAGAAATACCCGTCGATTGCAGACTATGCAGGATCTCCCA
CCCAGGGATTTCTTTGGTCTTTGCAGGGATTGCCGATCACGATGCAGAAA
TTGTGGCAGACGTCCTTCGGCTGTCCTTATGGCAAGACGTAAAAGATATT
CAGCAAGCTTTCTAGACCAT

BO24129.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:24:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG31804-RA 639 CG31804-PA 1..636 17..652 3180 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:24:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG31804-RA 856 CG31804-RA 102..737 17..652 3180 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17363597..17364232 17..652 3180 100 Plus
Blast to na_te.dros performed 2014-11-28 02:24:55
Subject Length Description Subject Range Query Range Score Percent Strand
jockey 5020 jockey DMLINEJA 5020bp Derived from M22874 (g157823) (Rel. 47, Last updated, Version 5). 4327..4376 620..669 106 68 Plus

BO24129.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:31 Download gff for BO24129.complete
Subject Subject Range Query Range Percent Splice Strand
CG31804-RA 103..738 17..654 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:50 Download gff for BO24129.complete
Subject Subject Range Query Range Percent Splice Strand
CG31804-RA 102..737 17..654 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:47 Download gff for BO24129.complete
Subject Subject Range Query Range Percent Splice Strand
CG31804-RA 102..737 17..654 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:47 Download gff for BO24129.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17363597..17364232 17..654 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:50 Download gff for BO24129.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17363597..17364232 17..654 99   Plus

BO24129.pep Sequence

Translation from 16 to 670

> BO24129.pep
MAEKNSSNDGQYFLQSKHFIDFRQNETDTVDSAMDVATRQSASTKKKIHI
HQGLGSRKTSKNIKRKMSKASQDLKRTSKTAAKPQKQRLSQSFKKRNIPE
KKFDKFPQAGVSRKQDGKFRTITIKKEAQCRLRTALKLLDILEGKYDDSD
RECSLDSKSLHGSVKRNTRRLQTMQDLPPRDFFGLCRDCRSRCRNCGRRP
SAVLMARRKRYSASFLDH

BO24129.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG31804-PA 212 CG31804-PA 1..212 1..212 1093 100 Plus