Clone BO24130 Report

Search the DGRC for BO24130

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG15425-RA
Protein status:BO24130.pep: Imported from assembly
Sequenced Size:649

Clone Sequence Records

BO24130.complete Sequence

649 bp assembled on 2010-05-05

GenBank Submission: KX798530

> BO24130.complete
GAAGTTATCAGTCGACATGAATTCCACACGGCGAGCTCGTGCCAAAATTG
TGACCAAGAAAAAGATTACTGGCCGTAAAGTGCCCAGAACAGATCCGCAG
CAGCAGTTTTACTTAAAAAACAGATTCAATGCAACTCGTCCTCGTCCAAA
ACAATCAACCGTGCCTCCTAGCCAGCGAATCTGGCGCAGGACAGTGGTCC
AGACCAAGCCGAAAATAAAAACAAAGATCCCCAGGCTATTTCGCATGGAT
CGGAATACAGGACTTCCGGTGGATTACGAGAGGACGGTCAACCAGGTGAT
GCAGTACGTGAATCCCAATTTGCGCAATCCACCCAGCGCGGAAAAGGTTT
TGGAGGAATTGCTGACGAAAATGCTTACTGAGGTCGTACGACAGGGTGGT
CGGTGTTGTCGAGAACACTCTCAATTGAGATCCTTGCTGAAGAACAGGTG
CCACTGCCACAGGTCGAGCCAGTTCCTAAGCAAGGCAGAGAAGGCCAGGT
TCGAGGCGAACGAGAGTCTGAGCCAATTTCATAGTGCTTGCAAACGGGGA
CCCTGTCGAATCCCCAGTACCAAACTTGGTCCCACGTACATGAGTAAGTT
CAACTTTAACCAGCTGAAAATCAAGAGCTCAGCAAGCTTTCTAGACCAT

BO24130.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:25:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG15425-RA 618 CG15425-PA 1..615 17..631 3075 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:25:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG15425-RA 795 CG15425-RA 79..693 17..631 3075 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:25:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4257650..4258173 17..540 2620 100 Plus
2L 23513712 2L 4258232..4258323 540..631 460 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:25:04 has no hits.

BO24130.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:32 Download gff for BO24130.complete
Subject Subject Range Query Range Percent Splice Strand
CG15425-RA 80..694 17..633 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:53 Download gff for BO24130.complete
Subject Subject Range Query Range Percent Splice Strand
CG15425-RA 79..693 17..633 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:52 Download gff for BO24130.complete
Subject Subject Range Query Range Percent Splice Strand
CG15425-RA 79..693 17..633 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:52 Download gff for BO24130.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4257650..4258173 17..540 100 -> Plus
2L 4258233..4258323 541..633 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:53 Download gff for BO24130.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4257650..4258173 17..540 100 -> Plus
arm_2L 4258233..4258323 541..633 97   Plus

BO24130.pep Sequence

Translation from 16 to 649

> BO24130.pep
MNSTRRARAKIVTKKKITGRKVPRTDPQQQFYLKNRFNATRPRPKQSTVP
PSQRIWRRTVVQTKPKIKTKIPRLFRMDRNTGLPVDYERTVNQVMQYVNP
NLRNPPSAEKVLEELLTKMLTEVVRQGGRCCREHSQLRSLLKNRCHCHRS
SQFLSKAEKARFEANESLSQFHSACKRGPCRIPSTKLGPTYMSKFNFNQL
KIKSSASFLDH

BO24130.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15425-PA 205 CG15425-PA 1..205 1..205 1076 100 Plus