Clone BO24133 Report

Search the DGRC for BO24133

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:33
Vector:pDNR-Dual
Associated Gene/TranscriptCG17601-RA
Protein status:BO24133.pep: Imported from assembly
Sequenced Size:694

Clone Sequence Records

BO24133.complete Sequence

694 bp assembled on 2010-05-05

GenBank Submission: KX799045

> BO24133.complete
GAAGTTATCAGTCGACATGGCCCCAAGGAAACGGATCTCGAGGATTGCAT
CACGCAGTGTGGCGACTGTGGAGCAGTTCACTAAGCGCATCAACTGCCGC
TCGGTTGGCACCCAAACCGATATCCTGGCTAAGGGTCCGGCGAAGCGCAA
AAAGGTCGAGAACAAGGTCAAGCTGCTGGATTCGCAGCCACTGTCGTCCC
AGTACTTGGCCATCCATCTGATGCCGGCAATCAATCCACTGGCAACTGAA
ACAATAAATCGGCGTCCGGATACATTCTCATATTTTCTCCCCGGTCCAAA
TGAGAAGTCTTGCCAGGCTGTGGCCGACCGAATCGCTGACGCAAGCGATC
GGGTCATCACCGCTAGCTCCGGAGAACGGCAAATAAACCACCTGAAGTCT
GTGGTGAGCAACCGCCGCGAAGAGGCCAACCAGTGGGATCGTAACCGTCT
TGAAATTCTGCTGGCCCAGATCAATGGTGACCCGCCGCCGCGCTGGAACT
CGGCCACCCAATTGTGGCTAGAGGTTGACATGCTGGAGAAGCGCATAGAG
GCCTACGACCAAGAAGAACTGCAGAATGCCAAGAATCGCAATTTGGACAG
GAAGCTAGACGGTGGGCAGGATAAGGGGCCGTCAGATGAAAAGGACCAGC
AGACTTTGAAGACTTTGAAGGCAACGGCAAGCTTTCTAGACCAT

BO24133.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:25:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG17601-RA 663 CG17601-PA 1..660 17..676 3300 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:25:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG17601-RA 960 CG17601-RA 34..693 17..676 3300 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:25:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 22547130..22547789 17..676 3300 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:25:22 has no hits.

BO24133.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:33 Download gff for BO24133.complete
Subject Subject Range Query Range Percent Splice Strand
CG17601-RA 34..693 17..678 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:02 Download gff for BO24133.complete
Subject Subject Range Query Range Percent Splice Strand
CG17601-RA 34..693 17..678 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:00 Download gff for BO24133.complete
Subject Subject Range Query Range Percent Splice Strand
CG17601-RA 34..693 17..678 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:00 Download gff for BO24133.complete
Subject Subject Range Query Range Percent Splice Strand
X 22547130..22547789 17..678 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:02 Download gff for BO24133.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21948966..21949625 17..678 99   Plus

BO24133.pep Sequence

Translation from 16 to 694

> BO24133.pep
MAPRKRISRIASRSVATVEQFTKRINCRSVGTQTDILAKGPAKRKKVENK
VKLLDSQPLSSQYLAIHLMPAINPLATETINRRPDTFSYFLPGPNEKSCQ
AVADRIADASDRVITASSGERQINHLKSVVSNRREEANQWDRNRLEILLA
QINGDPPPRWNSATQLWLEVDMLEKRIEAYDQEELQNAKNRNLDRKLDGG
QDKGPSDEKDQQTLKTLKATASFLDH

BO24133.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG17601-PA 220 CG17601-PA 1..220 1..220 1124 100 Plus