Clone BO24134 Report

Search the DGRC for BO24134

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:34
Vector:pDNR-Dual
Associated Gene/TranscriptCG2014-RA
Protein status:BO24134.pep: Imported from assembly
Sequenced Size:670

Clone Sequence Records

BO24134.complete Sequence

670 bp assembled on 2010-05-05

GenBank Submission: KX793884

> BO24134.complete
GAAGTTATCAGTCGACATGATAAGTTTCCTGAAATTGGCCAGGAATCCTG
GCCAGCTGCTGCTGCCTGGCAGTGGAGTGCTGCAATCCCAGTGGCTTCGT
GGCCAGAAGACCATGCCGGTGTACGATTACCGTTGCCAAAATCCGCCAAA
GTGGGGCTACTCGGCCTTCGGACGCAACCAGAAGACCTGGGGCGAGTGGA
CCTGTGCCAGGTTGGATGACCTGCTAAACTGGGGACGCAAGGGATCCCTC
TGGCCGCTGACCTTTGGTCTCGCCTGCTGCGCCGTCGAAATGATGCACAT
TGCGGCTCCTCGCTACGACATGGATCGCTACGGTGTGGTGTTCCGAGCAT
CTCCTCGCCAGGCGGACGTGCTCATCGTGGCCGGAACCCTGACCAACAAG
ATGGCACCGGCCTTTCGGAAGATCTACGACCAGATGCCCGAGCCGAGATG
GGTCATTTCCATGGGCAGTTGCGCCAATGGTGGCGGCTACTACCACTACT
CCTACTCGGTGGTTCGCGGCTGCGATCGCATTGTTCCGGTGGACATCTAC
GTGCCCGGATGTCCGCCCACCGCCGAGGCCTTAATGTACGGAATCCTGCA
GCTGCAGAAGAAGGTAAAGCGCATGAGGACCCTGCAGATGTGGTACAGGA
AGGCAAGCTTTCTAGACCAT

BO24134.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:25:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG2014-RB 639 CG2014-PB 1..636 17..652 3180 100 Plus
CG2014-RA 639 CG2014-PA 1..636 17..652 3180 100 Plus
CG9172-RC 666 CG9172-PC 217..663 206..652 1080 82.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG2014-RB 753 CG2014-RB 71..706 17..652 3180 100 Plus
CG2014-RA 715 CG2014-RA 33..668 17..652 3180 100 Plus
CG9172-RC 1282 CG9172-RC 295..741 206..652 1080 82.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:25:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29515845..29516480 17..652 3180 100 Plus
X 23542271 X 15986014..15986460 652..206 1080 82.8 Minus
Blast to na_te.dros performed on 2014-11-28 02:25:32 has no hits.

BO24134.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:35 Download gff for BO24134.complete
Subject Subject Range Query Range Percent Splice Strand
CG2014-RA 1..636 17..654 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:04 Download gff for BO24134.complete
Subject Subject Range Query Range Percent Splice Strand
CG2014-RA 33..668 17..654 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:04 Download gff for BO24134.complete
Subject Subject Range Query Range Percent Splice Strand
CG2014-RA 33..668 17..654 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:04 Download gff for BO24134.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29515845..29516480 17..654 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:04 Download gff for BO24134.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25341567..25342202 17..654 99   Plus

BO24134.pep Sequence

Translation from 16 to 670

> BO24134.pep
MISFLKLARNPGQLLLPGSGVLQSQWLRGQKTMPVYDYRCQNPPKWGYSA
FGRNQKTWGEWTCARLDDLLNWGRKGSLWPLTFGLACCAVEMMHIAAPRY
DMDRYGVVFRASPRQADVLIVAGTLTNKMAPAFRKIYDQMPEPRWVISMG
SCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQKKV
KRMRTLQMWYRKASFLDH

BO24134.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG2014-PB 212 CG2014-PB 1..212 1..212 1171 100 Plus
CG2014-PA 212 CG2014-PA 1..212 1..212 1171 100 Plus
CG9172-PC 221 CG9172-PC 37..221 27..212 873 85.5 Plus
CG9172-PA 221 CG9172-PA 37..221 27..212 873 85.5 Plus
CG9172-PB 221 CG9172-PB 37..221 27..212 873 85.5 Plus