BO24136.complete Sequence
736 bp assembled on 2010-05-05
GenBank Submission: KX799052
> BO24136.complete
GAAGTTATCAGTCGACATGGCGGCGGAAAAGTGTGCAGAAGAGTTTGGGG
ACTCCTCCGCGGCGTCCTTGAAAATTGTACCAAAGGACTATGCATATCCA
CTTCTAGAGGATCCGCAAGGCGCGCTGACCACGCCCACTGAAGGCGGGCG
GACGCTAGTTACCCGCGGTGGCTTTAACTACTTCCACTACGGATGCGATG
GCCACCAGGATGCTGGCTGGGGTTGTGGCTACCGCACCCTGCAATCGGCC
ATTTCCTGGATCCAACGTCGACAGGGGTCGAGCGGTCATGTTCCTTCCAT
CCGGGAGATTCAGCAGATCCTGGTGGCCATCGGCGACAAGGGTCCAGAGT
TCGTGGGCTCGCGCGACTGGATCGGAACGCTCGAGGAGTTCTACGTGATC
GATGTGCTGCACCAGGTGCCGTGCAAGATTCTTCACGCCAAGGAGCTTAG
CTCGGACGAGATCCTCGGCGAGCTTCGGAGCTATTTTGAGAAGTACCAAG
GCTTCGTCGCCATGGGCGGTCTGAGTGACACCGCCTCCAAGGCTATTACC
GGCTACCATTGCAGTGCACGCGGTCGCATCTTCCTGCAGGTGGTGGATCC
GCATTTCGTAGGCGTGCCCAGCTCCCGGCAGCACTTAATCGATCTGGGCT
ACGTTCGTTGGGTGCCCGTTGACGAGTTCGCCGGCAGCACGTACAACCTC
TGCCTCATCTTGCAGCCGGCAAGCTTTCTAGACCAT
BO24136.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:21:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30157-RB | 705 | CG30157-PB | 1..702 | 17..718 | 3510 | 100 | Plus |
| CG30157-RA | 705 | CG30157-PA | 1..702 | 17..718 | 3510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:21:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30157-RB | 927 | CG30157-RB | 158..859 | 17..718 | 3510 | 100 | Plus |
| CG30157-RA | 1034 | CG30157-RA | 265..966 | 17..718 | 3510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:21:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6974290..6974869 | 596..17 | 2900 | 100 | Minus |
| 2R | 25286936 | 2R | 6974106..6974229 | 718..595 | 620 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:21:01 has no hits.
BO24136.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:42:53 Download gff for
BO24136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30157-RA | 1..702 | 17..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:13 Download gff for
BO24136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30157-RA | 265..966 | 17..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:19 Download gff for
BO24136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30157-RA | 265..966 | 17..720 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:19 Download gff for
BO24136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6974104..6974228 | 596..720 | 98 | <- | Minus |
| 2R | 6974291..6974869 | 17..595 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:13 Download gff for
BO24136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2861609..2861733 | 596..720 | 98 | <- | Minus |
| arm_2R | 2861796..2862374 | 17..595 | 100 | | Minus |
BO24136.pep Sequence
Translation from 16 to 736
> BO24136.pep
MAAEKCAEEFGDSSAASLKIVPKDYAYPLLEDPQGALTTPTEGGRTLVTR
GGFNYFHYGCDGHQDAGWGCGYRTLQSAISWIQRRQGSSGHVPSIREIQQ
ILVAIGDKGPEFVGSRDWIGTLEEFYVIDVLHQVPCKILHAKELSSDEIL
GELRSYFEKYQGFVAMGGLSDTASKAITGYHCSARGRIFLQVVDPHFVGV
PSSRQHLIDLGYVRWVPVDEFAGSTYNLCLILQPASFLDH
BO24136.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30157-PB | 234 | CG30157-PB | 1..234 | 1..234 | 1252 | 100 | Plus |
| CG30157-PA | 234 | CG30157-PA | 1..234 | 1..234 | 1252 | 100 | Plus |
| CG16979-PA | 607 | CG16979-PA | 398..604 | 28..234 | 264 | 33.5 | Plus |
