BO24137.complete Sequence
700 bp assembled on 2012-04-24
GenBank Submission: KX797082
> BO24137.complete
GAAGTTATCAGTCGACATGAGCCAAATCAGCAAACTAACCCACATAAGCC
GCATAAGCCAAAACAATCAGTCGGACGGGAGTGATGAGGATAAGTTTCGC
CGTGCGAATTTTCCGGTTTACCCAAAACCGCTACCTGATCGAGATTTGAG
CTACAAAGCTGACGAAAATGAGTTCACAATGGTGGAGAAGGCGTCCTTGC
GGAATGCCTGGCGTTTAATTGAGCCATTTCAGCGCCGATTTGGCAAGGAA
AATTTTTACAGTTTCCTTACGAGGAACGAGGATCTCATAAACTTTTTCAG
GAAAGATGGAAAGATTAACCTGAGTAAGCTGCACGGGCATGCCATGGCAA
TGATGAAGCTGATGTCAAAGCTGGTCCAAACACTGGATTGCAATCTAGCT
TTCCGCTTGGCCTTGGATGAGAATCTTCCCACACATCTGAAGAATGGCAT
CGATCCGGATTATATGAGGATGCTGGCCACCGCACTGAAGAGTTATATCC
TTGCGTCTTCCGTTATCGAAAATCACAACTCATGTTCACTAAGCAATGGT
CTGGCCCGTCTGGTGGAGATCGTCGGTGAGTACGCCGTTGTGGATGAGGC
TAGAAAAAGAGCCATGTCCACTGCCCTTAGGACGACTGTTGACGATGCTG
GCAATCGCATTGTCAAGGTTGCTTTAGGCACTGCAAGCTTTCTAGACCAT
BO24137.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:40:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob2-RB | 669 | CG15180-PB | 1..666 | 17..682 | 3330 | 100 | Plus |
| glob2-RC | 660 | CG15180-PC | 1..559 | 17..575 | 2795 | 100 | Plus |
| glob2-RD | 630 | CG15180-PD | 234..627 | 289..682 | 1940 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:40:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob2-RB | 823 | CG15180-RB | 77..742 | 17..682 | 3330 | 100 | Plus |
| glob2-RC | 2336 | CG15180-RC | 77..635 | 17..575 | 2795 | 100 | Plus |
| glob2-RD | 784 | CG15180-RD | 310..703 | 289..682 | 1940 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:40:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6608594..6608838 | 261..17 | 1225 | 100 | Minus |
| 3R | 32079331 | 3R | 6607994..6608207 | 682..469 | 1070 | 100 | Minus |
| 3R | 32079331 | 3R | 6608334..6608543 | 469..260 | 1050 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:40:09 has no hits.
BO24137.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-06 12:06:48 Download gff for
BO24137.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob2-RA | 22..253 | 17..248 | 100 | == | Plus |
| glob2-RA | 254..648 | 289..684 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:34 Download gff for
BO24137.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob2-RB | 77..742 | 17..684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:56 Download gff for
BO24137.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob2-RB | 77..742 | 17..684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:15:54 Download gff for
BO24137.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob2-RB | 77..742 | 17..684 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:15:54 Download gff for
BO24137.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6607992..6608206 | 470..684 | 99 | <- | Minus |
| 3R | 6608334..6608541 | 262..469 | 100 | <- | Minus |
| 3R | 6608594..6608838 | 17..261 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:56 Download gff for
BO24137.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2433714..2433928 | 470..684 | 99 | <- | Minus |
| arm_3R | 2434056..2434263 | 262..469 | 100 | <- | Minus |
| arm_3R | 2434316..2434560 | 17..261 | 100 | | Minus |
BO24137.pep Sequence
Translation from 16 to 700
> BO24137.pep
MSQISKLTHISRISQNNQSDGSDEDKFRRANFPVYPKPLPDRDLSYKADE
NEFTMVEKASLRNAWRLIEPFQRRFGKENFYSFLTRNEDLINFFRKDGKI
NLSKLHGHAMAMMKLMSKLVQTLDCNLAFRLALDENLPTHLKNGIDPDYM
RMLATALKSYILASSVIENHNSCSLSNGLARLVEIVGEYAVVDEARKRAM
STALRTTVDDAGNRIVKVALGTASFLDH
BO24137.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob2-PB | 222 | CG15180-PB | 1..222 | 1..222 | 1132 | 100 | Plus |
| glob2-PD | 209 | CG15180-PD | 1..209 | 1..222 | 1041 | 94.1 | Plus |
| glob2-PC | 219 | CG15180-PC | 1..186 | 1..186 | 958 | 100 | Plus |
| glob3-PA | 196 | CG14675-PA | 18..169 | 35..189 | 228 | 35.5 | Plus |
