Clone BO24138 Report

Search the DGRC for BO24138

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:38
Vector:pDNR-Dual
Associated Gene/TranscriptCG15912-RA
Protein status:BO24138.pep: Imported from assembly
Sequenced Size:772

Clone Sequence Records

BO24138.complete Sequence

772 bp assembled on 2010-05-05

GenBank Submission: KX797581

> BO24138.complete
GAAGTTATCAGTCGACATGTCGTTGACTTCGCAATTTGTTGCGAATTTGA
AACGCTTTCGCCTGGTGACCTTCGATGTAACGGACACGCTGCTTCGCCTG
GAGGATCCCCTTCGCCAGTACCATCAGACGGCAGAGGAGTTCGGGGTCAC
CGGAGTGGATCGCCGCCGATTGGAACAATGCTTTCGCCAGCAATTCAAGG
CGATGAGCAGCGAACATCCAAACTTTGGCCGTTACTCGCCGGGATTGGAT
TGGCAGCGTTGGTGGCTTCAGCTGGTGGCTCGAACCTTTAGCTGCGTGGA
CCACGGTCTGGCGCCCGAGAAGCTGGAGAAGATCGGCCAGCGGCTAATTT
CCGTTTTTCGGACCAGCGCCTGTTGGAGTCACGTGAATGGTGCCCAGGAG
TTGGTGCAGAACGTCCGAAATGCCGGCAAATGTGTGGGCATCATCTCCAA
TTTCGATTCGTCACTGCCACAAGTCCTGGACGCCATGGGCTTTGCCGGCA
AATTCGATTTCATTCTGACTTCCTACGAAGCCGGTGTTATGAAGCCCGAA
CGCGGTATCTTCGAAATTCCGCTGCAGAGATTGCAAATTCCAGCGGAGCA
GGCCCTTCACATTGGCAACAAGTTGGATATGGACTATGAAGGTGCCCGGA
ATTGCGGCTGGAGCGGTTTGCTTGTGAGCAACGCTGACAATCCCCATTCT
TTTGCCAGTCTTTCCAGTCTGTTGGAGGCCTTAAAAACCCAACCAATCCG
ATGGGCAAGCTTTCTAGACCAT

BO24138.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:21:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG15912-RA 741 CG15912-PA 1..738 17..754 3690 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:21:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG15912-RA 888 CG15912-RA 5..742 17..754 3690 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:21:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4549074..4549811 17..754 3690 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:21:10 has no hits.

BO24138.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:42:55 Download gff for BO24138.complete
Subject Subject Range Query Range Percent Splice Strand
CG15912-RA 1..738 17..756 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:16 Download gff for BO24138.complete
Subject Subject Range Query Range Percent Splice Strand
CG15912-RA 5..742 17..756 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:22 Download gff for BO24138.complete
Subject Subject Range Query Range Percent Splice Strand
CG15912-RA 5..742 17..756 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:22 Download gff for BO24138.complete
Subject Subject Range Query Range Percent Splice Strand
X 4549074..4549811 17..756 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:16 Download gff for BO24138.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4443107..4443844 17..756 99   Plus

BO24138.pep Sequence

Translation from 16 to 772

> BO24138.pep
MSLTSQFVANLKRFRLVTFDVTDTLLRLEDPLRQYHQTAEEFGVTGVDRR
RLEQCFRQQFKAMSSEHPNFGRYSPGLDWQRWWLQLVARTFSCVDHGLAP
EKLEKIGQRLISVFRTSACWSHVNGAQELVQNVRNAGKCVGIISNFDSSL
PQVLDAMGFAGKFDFILTSYEAGVMKPERGIFEIPLQRLQIPAEQALHIG
NKLDMDYEGARNCGWSGLLVSNADNPHSFASLSSLLEALKTQPIRWASFL
DH

BO24138.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG15912-PA 246 CG15912-PA 1..246 1..246 1297 100 Plus
Reg-2-PA 260 CG3200-PA 3..260 10..246 366 34 Plus