Clone BO24139 Report

Search the DGRC for BO24139

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:39
Vector:pDNR-Dual
Associated Gene/TranscriptGstE10-RA
Protein status:BO24139.pep: Imported from assembly
Sequenced Size:754

Clone Sequence Records

BO24139.complete Sequence

754 bp assembled on 2010-05-05

GenBank Submission: KX794552

> BO24139.complete
GAAGTTATCAGTCGACATGGCTAACCTGATTCTATATGGCACTGAGTCCA
GTCCGCCGGTCCGTGCCGTTTTGTTGACCCTTCGTGCCCTCCAGCTGGAC
CATGAATTCCATACGCTGGACATGCAGGCCGGCGATCATCTGAAGCCGGA
TATGTTACGCAAGAATCCCCAGCACACGGTACCCATGCTGGAGGATGGTG
AGTCATGCATTTGGGACTCACACGCCATCATCGGCTATCTGGTGAACAAG
TACGCCCAGTCGGATGAGCTCTATCCAAAGGATCCGCTGAAGCGAGCTGT
GGTGGATCAGCGGCTGCATTTCGAGACCGGTGTCCTTTTTCACGGCATCT
TCAAGCAATTGCAGAGAGCTCTGTTCAAAGAGAATGCCACTGAGGTGCCC
AAGGATCGTTTGGCTGAGTTGAAGGATGCCTACGCCTTGCTGGAGCAATT
TCTGGCGGAGAATCCCTATGTGGCCGGTCCTCAGCTGACCATCGCCGATT
TTAGCATTGTGGCCACCGTGAGCACTCTGCACCTGAGCTACTGTCCCGTG
GATGCGACCAAATACCCCAAATTATCCGCCTGGTTGGCACGTATCTCCGC
ATTGCCCTTCTATGAGGAGGACAACTTGAGAGGAGCCCGCTTGTTGGCCG
ATAAGATTCGCTCCAAGCTGCCCAAGCAGTTTGACAAGCTGTGGCAAAAG
GCCTTTGAGGACATCAAGAGCGGAGCTGGAAAACAGGCAAGCTTTCTAGA
CCAT

BO24139.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:21:21
Subject Length Description Subject Range Query Range Score Percent Strand
GstE10-RB 723 CG17522-PB 1..720 17..736 3600 100 Plus
GstE10-RA 723 CG17522-PA 1..720 17..736 3600 100 Plus
GstE5-RA 669 CG17527-PA 145..311 161..327 280 77.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:21:23
Subject Length Description Subject Range Query Range Score Percent Strand
GstE10-RB 1134 CG17522-RB 307..1026 17..736 3600 100 Plus
GstE10-RA 889 CG17522-RA 62..781 17..736 3600 100 Plus
GstE5-RA 734 CG17527-RA 174..340 161..327 280 77.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:21:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18396746..18397465 736..17 3600 100 Minus
2R 25286936 2R 18404778..18404944 161..327 280 77.8 Plus
2R 25286936 2R 18403419..18403592 161..334 270 77 Plus
2R 25286936 2R 18407099..18407268 161..330 250 76.5 Plus
2R 25286936 2R 18398582..18398705 161..284 245 79.8 Plus
2R 25286936 2R 18408004..18408173 161..330 205 74.7 Plus
Blast to na_te.dros performed on 2014-11-28 02:21:20 has no hits.

BO24139.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:42:56 Download gff for BO24139.complete
Subject Subject Range Query Range Percent Splice Strand
GstE10-RA 1..720 17..738 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:21 Download gff for BO24139.complete
Subject Subject Range Query Range Percent Splice Strand
GstE10-RA 62..781 17..738 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:26 Download gff for BO24139.complete
Subject Subject Range Query Range Percent Splice Strand
GstE10-RA 62..781 17..738 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:26 Download gff for BO24139.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18396743..18397465 17..738 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:21 Download gff for BO24139.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14284248..14284970 17..738 99   Minus

BO24139.pep Sequence

Translation from 16 to 754

> BO24139.pep
MANLILYGTESSPPVRAVLLTLRALQLDHEFHTLDMQAGDHLKPDMLRKN
PQHTVPMLEDGESCIWDSHAIIGYLVNKYAQSDELYPKDPLKRAVVDQRL
HFETGVLFHGIFKQLQRALFKENATEVPKDRLAELKDAYALLEQFLAENP
YVAGPQLTIADFSIVATVSTLHLSYCPVDATKYPKLSAWLARISALPFYE
EDNLRGARLLADKIRSKLPKQFDKLWQKAFEDIKSGAGKQASFLDH

BO24139.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:46
Subject Length Description Subject Range Query Range Score Percent Strand
GstE10-PB 240 CG17522-PB 1..240 1..240 1247 100 Plus
GstE10-PA 240 CG17522-PA 1..240 1..240 1247 100 Plus
GstE7-PA 223 CG17531-PA 1..214 1..215 597 54.9 Plus
GstE9-PA 221 CG17534-PA 1..219 1..220 578 50.5 Plus
GstE6-PA 222 CG17530-PA 1..209 1..210 575 53.3 Plus