BO24141.complete Sequence
610 bp assembled on 2011-06-29
GenBank Submission: KX797101
> BO24141.complete
GAAGTTATCAGTCGACATGTCTACCTTTCGGTGTATTTACTTTCTATTTT
CACTATTGATCTGGAGTGCTCAATCGGATAAATCTCTATCGAAACAGTCC
GGAAATGTAACCACAATTACAAATTTGAGTGTGAAGGCAAGATCCGCAGA
TCAGTGCACTCCTGGCACGATACTTAAGCTGAGAGTGGACAATTTCTTCG
AAACCACCGAAGATGGGACGTTCTTCGTAAAGTTCTATGAGCCGAATTGC
ATGGGCTGCCACGATTTCGAAACTACCTGGACTGACATGGCCAAATCGTT
CAAGTCGAAGGAAAACATTTGTTTTGCTGAGCTCAATTGCAAGTTCGCAA
AAACCATATGCAACGACTATGAGCTTCGGTATGAACCAAACCTCATATGG
CTGGAAAATGGGGAGGAAGTTCAGCAGTACGACGGGGACTTGACTTCCCC
TGGCATTAAAATATTCGTTTGGGAAATGATTAGGCGGAATGAAACCAACA
AATCCGCCGCCAAAAGGCCATATTTTCACACCAAGCCAATTATCCTCTTT
GGATGGTTCCTCTATGCTGGGGATGTGATTTCGTATTTTGCAGCAAGCTT
TCTAGACCAT
BO24141.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:37:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18132-RA | 579 | CG18132-PA | 1..576 | 17..592 | 2880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:37:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18132-RA | 684 | CG18132-RA | 41..616 | 17..592 | 2880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:37:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1516863..1517438 | 592..17 | 2880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:37:27 has no hits.
BO24141.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:42:58 Download gff for
BO24141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18132-RA | 41..619 | 17..596 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-29 12:27:21 Download gff for
BO24141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18132-RA | 41..616 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:05:29 Download gff for
BO24141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18132-RA | 41..616 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:23:26 Download gff for
BO24141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18132-RA | 41..616 | 17..594 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:23:26 Download gff for
BO24141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1516861..1517438 | 17..594 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:05:29 Download gff for
BO24141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1516861..1517438 | 17..594 | 99 | | Minus |
BO24141.pep Sequence
Translation from 16 to 610
> BO24141.pep
MSTFRCIYFLFSLLIWSAQSDKSLSKQSGNVTTITNLSVKARSADQCTPG
TILKLRVDNFFETTEDGTFFVKFYEPNCMGCHDFETTWTDMAKSFKSKEN
ICFAELNCKFAKTICNDYELRYEPNLIWLENGEEVQQYDGDLTSPGIKIF
VWEMIRRNETNKSAAKRPYFHTKPIILFGWFLYAGDVISYFAASFLDH
BO24141.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:54:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18132-PA | 192 | CG18132-PA | 1..192 | 1..192 | 1041 | 100 | Plus |
prtp-PD | 353 | CG1837-PD | 92..208 | 39..155 | 200 | 29.1 | Plus |
prtp-PC | 416 | CG1837-PC | 155..271 | 39..155 | 200 | 29.1 | Plus |
prtp-PB | 416 | CG1837-PB | 155..271 | 39..155 | 200 | 29.1 | Plus |
prtp-PA | 416 | CG1837-PA | 155..271 | 39..155 | 200 | 29.1 | Plus |