Clone BO24145 Report

Search the DGRC for BO24145

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG31269-RB
Protein status:BO24145.pep: Imported from assembly
Sequenced Size:853

Clone Sequence Records

BO24145.complete Sequence

853 bp assembled on 2010-05-05

GenBank Submission: KX795550

> BO24145.complete
GAAGTTATCAGTCGACATGTCGGCAGTGGTTTTACTTATTTTGTTGGGTC
TTTCGGGACTCGTATCCATAACAGCCATACGAATCAAGGGAAACTCAACG
GATGGTCGGTTTTACAAGGATCAACGGATCATCGGTGGTCAGGCAGCTGA
GGATGGCTTCGCTCCCTATCAGATATCCTTGCAGGGAATCTCCGGTGCCC
ACTCCTGTGGTGGTGCCATAATAAACGAGACCTTCGTCCTGACAGCCGCT
CACTGTGTCGAAAATGCCTTTATTCCATGGCTGGTTGTCGTCACGGGCAC
TAATAAGTATAACCAACCAGGAGGCAGGTATTTCCTAAAAGCCATTCATA
TCCATTGTAACTACGATAATCCGGAGATGCACAATGATATTGCCCTGTTG
GAATTAGTTGAGCCAATTGCTTGGGACGAGCGCACTCAGCCGATCCCGTT
GCCCTTGGTGCCCATGCAGCCGGGTGATGAAGTAATCCTCACTGGTTGGG
GATCCACGGTCCTCTGGGGCACCAGTCCCATCGATTTGCAGGTTCTATAC
CTTCAGTACGTTCCCCATCGCGAGTGCAAAGCCCTGCTGAGCAACGATGA
AGATTGTGATGTGGGTCACATTTGCACTTTTTCGCGGCTGGGAGAAGGTG
CCTGCCATGGAGATTCCGGTGGACCTCTGGTCAGCAATGGTTACCTGGTG
GGACTGGTCAACTGGGGATGGCCCTGCGCAACAGGAGTTCCGGACGTTCA
TGCCAGTGTTTATTTCTATCGTGATTGGATACGCAATGTCATGAGTGGGA
ATTCAAAGTGCACTGGGTTCAGCTCCAACCAATCCGCAAGCTTTCTAGAC
CAT

BO24145.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:21:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG31269-RB 822 CG31269-PB 1..819 17..835 4095 100 Plus
CG31265-RA 801 CG31265-PA 591..709 610..728 235 79.8 Plus
CG5255-RA 822 CG5255-PA 622..684 656..718 180 85.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:21:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31269-RB 937 CG31269-RB 6..824 17..835 4095 100 Plus
CG31265-RA 909 CG31265-RA 625..743 610..728 235 79.8 Plus
CG5255-RA 914 CG5255-RA 640..702 656..718 180 85.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:21:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17127131..17127857 17..743 3635 100 Plus
3R 32079331 3R 17127991..17128088 738..835 475 99 Plus
3R 32079331 3R 17128836..17128954 610..728 235 79.8 Plus
Blast to na_te.dros performed on 2014-11-28 02:21:49 has no hits.

BO24145.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:04 Download gff for BO24145.complete
Subject Subject Range Query Range Percent Splice Strand
CG31269-RB 6..824 17..837 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:32 Download gff for BO24145.complete
Subject Subject Range Query Range Percent Splice Strand
CG31269-RB 6..824 17..837 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:37 Download gff for BO24145.complete
Subject Subject Range Query Range Percent Splice Strand
CG31269-RB 6..824 17..837 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:37 Download gff for BO24145.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17127131..17127856 17..742 100 -> Plus
3R 17127996..17128088 743..837 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:32 Download gff for BO24145.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12952853..12953578 17..742 100 -> Plus
arm_3R 12953718..12953810 743..837 97   Plus

BO24145.pep Sequence

Translation from 16 to 853

> BO24145.pep
MSAVVLLILLGLSGLVSITAIRIKGNSTDGRFYKDQRIIGGQAAEDGFAP
YQISLQGISGAHSCGGAIINETFVLTAAHCVENAFIPWLVVVTGTNKYNQ
PGGRYFLKAIHIHCNYDNPEMHNDIALLELVEPIAWDERTQPIPLPLVPM
QPGDEVILTGWGSTVLWGTSPIDLQVLYLQYVPHRECKALLSNDEDCDVG
HICTFSRLGEGACHGDSGGPLVSNGYLVGLVNWGWPCATGVPDVHASVYF
YRDWIRNVMSGNSKCTGFSSNQSASFLDH

BO24145.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31269-PB 273 CG31269-PB 1..273 1..273 1482 100 Plus
CG31265-PA 266 CG31265-PA 8..264 6..265 763 57.9 Plus
CG17475-PB 288 CG17475-PB 9..284 5..271 673 48.2 Plus
CG17475-PA 288 CG17475-PA 9..284 5..271 673 48.2 Plus
CG5255-PA 273 CG5255-PA 1..254 5..260 607 50 Plus