BO24145.complete Sequence
853 bp assembled on 2010-05-05
GenBank Submission: KX795550
> BO24145.complete
GAAGTTATCAGTCGACATGTCGGCAGTGGTTTTACTTATTTTGTTGGGTC
TTTCGGGACTCGTATCCATAACAGCCATACGAATCAAGGGAAACTCAACG
GATGGTCGGTTTTACAAGGATCAACGGATCATCGGTGGTCAGGCAGCTGA
GGATGGCTTCGCTCCCTATCAGATATCCTTGCAGGGAATCTCCGGTGCCC
ACTCCTGTGGTGGTGCCATAATAAACGAGACCTTCGTCCTGACAGCCGCT
CACTGTGTCGAAAATGCCTTTATTCCATGGCTGGTTGTCGTCACGGGCAC
TAATAAGTATAACCAACCAGGAGGCAGGTATTTCCTAAAAGCCATTCATA
TCCATTGTAACTACGATAATCCGGAGATGCACAATGATATTGCCCTGTTG
GAATTAGTTGAGCCAATTGCTTGGGACGAGCGCACTCAGCCGATCCCGTT
GCCCTTGGTGCCCATGCAGCCGGGTGATGAAGTAATCCTCACTGGTTGGG
GATCCACGGTCCTCTGGGGCACCAGTCCCATCGATTTGCAGGTTCTATAC
CTTCAGTACGTTCCCCATCGCGAGTGCAAAGCCCTGCTGAGCAACGATGA
AGATTGTGATGTGGGTCACATTTGCACTTTTTCGCGGCTGGGAGAAGGTG
CCTGCCATGGAGATTCCGGTGGACCTCTGGTCAGCAATGGTTACCTGGTG
GGACTGGTCAACTGGGGATGGCCCTGCGCAACAGGAGTTCCGGACGTTCA
TGCCAGTGTTTATTTCTATCGTGATTGGATACGCAATGTCATGAGTGGGA
ATTCAAAGTGCACTGGGTTCAGCTCCAACCAATCCGCAAGCTTTCTAGAC
CAT
BO24145.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:21:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31269-RB | 822 | CG31269-PB | 1..819 | 17..835 | 4095 | 100 | Plus |
CG31265-RA | 801 | CG31265-PA | 591..709 | 610..728 | 235 | 79.8 | Plus |
CG5255-RA | 822 | CG5255-PA | 622..684 | 656..718 | 180 | 85.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:21:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31269-RB | 937 | CG31269-RB | 6..824 | 17..835 | 4095 | 100 | Plus |
CG31265-RA | 909 | CG31265-RA | 625..743 | 610..728 | 235 | 79.8 | Plus |
CG5255-RA | 914 | CG5255-RA | 640..702 | 656..718 | 180 | 85.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:21:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17127131..17127857 | 17..743 | 3635 | 100 | Plus |
3R | 32079331 | 3R | 17127991..17128088 | 738..835 | 475 | 99 | Plus |
3R | 32079331 | 3R | 17128836..17128954 | 610..728 | 235 | 79.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:21:49 has no hits.
BO24145.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:04 Download gff for
BO24145.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31269-RB | 6..824 | 17..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:32 Download gff for
BO24145.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31269-RB | 6..824 | 17..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:37 Download gff for
BO24145.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31269-RB | 6..824 | 17..837 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:37 Download gff for
BO24145.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17127131..17127856 | 17..742 | 100 | -> | Plus |
3R | 17127996..17128088 | 743..837 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:32 Download gff for
BO24145.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12952853..12953578 | 17..742 | 100 | -> | Plus |
arm_3R | 12953718..12953810 | 743..837 | 97 | | Plus |
BO24145.pep Sequence
Translation from 16 to 853
> BO24145.pep
MSAVVLLILLGLSGLVSITAIRIKGNSTDGRFYKDQRIIGGQAAEDGFAP
YQISLQGISGAHSCGGAIINETFVLTAAHCVENAFIPWLVVVTGTNKYNQ
PGGRYFLKAIHIHCNYDNPEMHNDIALLELVEPIAWDERTQPIPLPLVPM
QPGDEVILTGWGSTVLWGTSPIDLQVLYLQYVPHRECKALLSNDEDCDVG
HICTFSRLGEGACHGDSGGPLVSNGYLVGLVNWGWPCATGVPDVHASVYF
YRDWIRNVMSGNSKCTGFSSNQSASFLDH
BO24145.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31269-PB | 273 | CG31269-PB | 1..273 | 1..273 | 1482 | 100 | Plus |
CG31265-PA | 266 | CG31265-PA | 8..264 | 6..265 | 763 | 57.9 | Plus |
CG17475-PB | 288 | CG17475-PB | 9..284 | 5..271 | 673 | 48.2 | Plus |
CG17475-PA | 288 | CG17475-PA | 9..284 | 5..271 | 673 | 48.2 | Plus |
CG5255-PA | 273 | CG5255-PA | 1..254 | 5..260 | 607 | 50 | Plus |