BO24151.complete Sequence
712 bp assembled on 2010-05-05
GenBank Submission: KX796047
> BO24151.complete
GAAGTTATCAGTCGACATGTTTCTGGACGCCATCTTCTTTATACCGACAC
TGTTCACTTACCTGCTTATCGGACTGCTCATCGTCATCCTGTGCTTCGTG
GTGGTCTATATCAGCCACAAGATCTATGTCTCCGTCTACGACAACCTGCC
TCTGGCCGCCTTGCCCGGCAACTCACGGCAACAGCTCCTGGGACTGCGTC
ACTCCAATCATGCGATGACCATACGGGAATACCTGGACAGCTCGCTCCGC
AGCCCACGTTCCAATCAGCCGAGCTTACGGTCAGTTTGGATTCAGAACCG
GTCACAGATCCTGGAGACCTCTTCGGTGATGCGTATAGTGCTCTCCCTGG
AGCCCTGCTACCTGGTCAGCGCCGAGTTCGATGTTAGTTCCAGCCGGAAG
GCCATCAGTTTCTTGTGCAACTGCCGGGATCAGCCCGTGTGTGCTGCCTC
TGAACCGAGGCCTTCTGGGTCCTTGCATATAGTGCGGTTCTATGACCACC
TCTCCAAGATCCCGCGCCTCAAAGTCATGCTCAAGTGTAACCAAAGGCGG
CCGGACCCGAGGCCGGACAGTCGTATCCAGTTGACCCTCGACGACGTGAT
CCAGGAGGCCAGAGATAACCAGGATGCCAGGTGTACGGATAACGCCGCCG
CCTGCCGACCTGGTTCCTCAAGGCGGAACTCCCGGATACCGGATGCAAGC
TTTCTAGACCAT
BO24151.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:26:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3288-RB | 681 | CG3288-PB | 1..678 | 17..694 | 3390 | 100 | Plus |
| CG3288-RA | 681 | CG3288-PA | 1..678 | 17..694 | 3390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:26:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3288-RB | 908 | CG3288-RB | 29..707 | 16..694 | 3395 | 100 | Plus |
| CG3288-RA | 790 | CG3288-RA | 29..707 | 16..694 | 3395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:26:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20836584..20836952 | 326..694 | 1845 | 100 | Plus |
| 3L | 28110227 | 3L | 20836210..20836520 | 16..326 | 1555 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:26:51 has no hits.
BO24151.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:45 Download gff for
BO24151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3288-RA | 7..678 | 23..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:37 Download gff for
BO24151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3288-RA | 36..707 | 23..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:30 Download gff for
BO24151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3288-RA | 36..707 | 23..696 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:30 Download gff for
BO24151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20836217..20836520 | 23..326 | 100 | -> | Plus |
| 3L | 20836585..20836952 | 327..696 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:37 Download gff for
BO24151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20829317..20829620 | 23..326 | 100 | -> | Plus |
| arm_3L | 20829685..20830052 | 327..696 | 99 | | Plus |
BO24151.pep Sequence
Translation from 16 to 712
> BO24151.pep
MFLDAIFFIPTLFTYLLIGLLIVILCFVVVYISHKIYVSVYDNLPLAALP
GNSRQQLLGLRHSNHAMTIREYLDSSLRSPRSNQPSLRSVWIQNRSQILE
TSSVMRIVLSLEPCYLVSAEFDVSSSRKAISFLCNCRDQPVCAASEPRPS
GSLHIVRFYDHLSKIPRLKVMLKCNQRRPDPRPDSRIQLTLDDVIQEARD
NQDARCTDNAAACRPGSSRRNSRIPDASFLDH
BO24151.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:05:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3288-PB | 226 | CG3288-PB | 1..226 | 1..226 | 1165 | 100 | Plus |
| CG3288-PA | 226 | CG3288-PA | 1..226 | 1..226 | 1165 | 100 | Plus |
