BO24152.complete Sequence
1000 bp assembled on 2010-05-05
GenBank Submission: KX797718
> BO24152.complete
GAAGTTATCAGTCGACATGAAATCAGAAACTGAGACTCTGCTCTTGCAAA
ATGCTGTTCCTATAATAGATTTAGAAAATACCATCGAGGACGTGGCGACA
AATCTGAGAGAGGCTTTATCTGAAAAGGGGTATGCTCTGCTAATAAACCA
CGGTATTTCAAATGAGAAGATTAAAAAAGCTTGGAAGTATTTCGATGGCT
TTGTCGACCTGACCGATGAAGTTAAATTGGCATTTGAGAGAAGCAAAGCT
CCAGATGGCGAAAATCATGGTTACGTGAGTCCAGGAATGGAGCGATTTGA
TGGCAGGACACCGGAGCTGCGCCATGCTTACAATATATGCAAGCTGCAGG
ATAAATTTCTGCCTGAACAGCAGCTACCAGGATTTAGCAGGCACATTAAC
TCCTTAGTCGATGACTTCAATGAATTGGGTAGGTTTATTCTTAAGGCTCT
GGCAATTTCATTGGATGCTCCACCTTCGTTCTTCACGGATAAACATTCGT
TTATGCTGTCCGACGATCGCTTTAATCTGACCACCCTACGGATGCTGTTT
TACCCGCCCGTGGAAGATCAGGATCATGGAAGAAGCTTCATACGATGTGG
AGCCCATGCCGACTACTGCACCTTTACTCTGTTGGCTCAGGATTCGGAGG
GTGGATTGGAGGTCAAACTGCGGGGCAGTGACAAGTGGGAGCGAGTGGGT
CATCTGCCAGGAGCACTCTTCATAAACTGCGGTGAAACCATGGCTATCTG
GACAGATCAGTTCTACCACGCTTTGCAACATAGAGTAGTGATTCCCGATC
AGGTTGATATTCGCCATCGAGGCCGGCACTCCATTGCCTATTTCTGTCAT
CCTGATAACTCTGCACTGATTAATCCAAAAGATTTAAATATTACAACTAA
GCAGACGACAAGTGACGTAATACAAAACGCATATGATATAACTATGGCTC
TGGCAAAAGGCGCATTTGCACATCATTATTCTGCAAGCTTTCTAGACCAT
BO24152.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:27:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33093-RA | 969 | CG33093-PA | 1..966 | 17..982 | 4830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:27:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33093-RA | 1055 | CG33093-RA | 40..1005 | 17..982 | 4830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:26:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22531071..22531678 | 775..168 | 3040 | 100 | Minus |
| 3R | 32079331 | 3R | 22531731..22531883 | 169..17 | 765 | 100 | Minus |
| 3R | 32079331 | 3R | 22530871..22531014 | 918..775 | 720 | 100 | Minus |
| 3R | 32079331 | 3R | 22530744..22530807 | 982..919 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:27:00 has no hits.
BO24152.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:46 Download gff for
BO24152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33093-RA | 40..1005 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:42 Download gff for
BO24152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33093-RA | 40..1005 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:33 Download gff for
BO24152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33093-RA | 40..1005 | 17..984 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:33 Download gff for
BO24152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22530740..22530807 | 919..984 | 97 | <- | Minus |
| 3R | 22530871..22531013 | 776..918 | 100 | <- | Minus |
| 3R | 22531071..22531676 | 170..775 | 100 | <- | Minus |
| 3R | 22531731..22531883 | 17..169 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:42 Download gff for
BO24152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18356462..18356529 | 919..984 | 97 | <- | Minus |
| arm_3R | 18356593..18356735 | 776..918 | 100 | <- | Minus |
| arm_3R | 18356793..18357398 | 170..775 | 100 | <- | Minus |
| arm_3R | 18357453..18357605 | 17..169 | 100 | | Minus |
BO24152.pep Sequence
Translation from 16 to 1000
> BO24152.pep
MKSETETLLLQNAVPIIDLENTIEDVATNLREALSEKGYALLINHGISNE
KIKKAWKYFDGFVDLTDEVKLAFERSKAPDGENHGYVSPGMERFDGRTPE
LRHAYNICKLQDKFLPEQQLPGFSRHINSLVDDFNELGRFILKALAISLD
APPSFFTDKHSFMLSDDRFNLTTLRMLFYPPVEDQDHGRSFIRCGAHADY
CTFTLLAQDSEGGLEVKLRGSDKWERVGHLPGALFINCGETMAIWTDQFY
HALQHRVVIPDQVDIRHRGRHSIAYFCHPDNSALINPKDLNITTKQTTSD
VIQNAYDITMALAKGAFAHHYSASFLDH
BO24152.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:05:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33093-PA | 322 | CG33093-PA | 1..322 | 1..322 | 1712 | 100 | Plus |
| CG33099-PA | 331 | CG33099-PA | 8..317 | 2..308 | 908 | 55.9 | Plus |
| CG5346-PA | 403 | CG5346-PA | 12..356 | 6..290 | 800 | 47.4 | Plus |
