BO24157.complete Sequence
541 bp assembled on 2010-05-05
GenBank Submission: KX796804
> BO24157.complete
GAAGTTATCAGTCGACATGTTGGCGGATAGTGCAACTTTGACTTTAGCTA
TCTTTGTAGGTACGTCTGTTGTGCTTGTTTCGGTTTCATCTTCAAGTTTG
TCGGAAATTAAGCCGATGAACAACGGACATATCGTGACGCCTTTGGGATG
CCATCGTCGTGTATACACGTATAAAGTGACACAGTCCGATCTTCAAGGAC
ACGAGTGTTGGGACTATGTAAGCGTTTGGTCGTGTTGGGGACGATGCGAC
TCAAGCGAAATTTCCGATTGGAAGTTTCCTTACAAGCGTTCGTTCCATCC
TGTTTGTGTCCACGCCCAGCGGCAGCTGGTAGTAGCTATCCTAAAGAATT
GTCACCCTAAAGCAGAGGACAGCGTAAGCAAGTACCAGTACATGGAGGCA
GTGAACTGTCACTGCCAGACGTGCTCCACACAGGATACCAGCTGCGAAGC
TCCGGCCAATAATGAAATGGCTGGGGGCAGCAGGGCAATCATGGTAGGCG
CCGATACCAAAAACTTGGACTATGCAAGCTTTCTAGACCAT
BO24157.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:27:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gpb5-RA | 510 | CG40041-PA | 1..507 | 17..523 | 2535 | 100 | Plus |
| Gpb5-RC | 510 | CG40041-PC | 24..507 | 40..523 | 2420 | 100 | Plus |
| Gpb5-RD | 411 | CG40041-PD | 1..408 | 116..523 | 2040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:27:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gpb5-RA | 657 | CG40041-RA | 31..537 | 17..523 | 2535 | 100 | Plus |
| Gpb5-RC | 734 | CG40041-RC | 131..614 | 40..523 | 2420 | 100 | Plus |
| Gpb5-RD | 697 | CG40041-RD | 102..577 | 48..523 | 2380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:27:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 23311861..23312344 | 40..523 | 2420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:27:25 has no hits.
BO24157.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:49 Download gff for
BO24157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gpb5-RA | 51..552 | 22..525 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:52 Download gff for
BO24157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gpb5-RA | 36..537 | 22..525 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:41 Download gff for
BO24157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gpb5-RA | 36..537 | 22..525 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:41 Download gff for
BO24157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 23311783..23311800 | 22..39 | 100 | -> | Plus |
| 2L | 23311861..23312344 | 40..525 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:52 Download gff for
BO24157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2LHet | 167298..167315 | 22..39 | 100 | -> | Plus |
| 2LHet | 167376..167859 | 40..525 | 99 | | Plus |
BO24157.pep Sequence
Translation from 16 to 541
> BO24157.pep
MLADSATLTLAIFVGTSVVLVSVSSSSLSEIKPMNNGHIVTPLGCHRRVY
TYKVTQSDLQGHECWDYVSVWSCWGRCDSSEISDWKFPYKRSFHPVCVHA
QRQLVVAILKNCHPKAEDSVSKYQYMEAVNCHCQTCSTQDTSCEAPANNE
MAGGSRAIMVGADTKNLDYASFLDH
BO24157.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:06:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gpb5-PA | 169 | CG40041-PA | 1..169 | 1..169 | 918 | 100 | Plus |
| Gpb5-PC | 169 | CG40041-PC | 9..169 | 9..169 | 882 | 100 | Plus |
| Gpb5-PD | 136 | CG40041-PD | 1..136 | 34..169 | 771 | 100 | Plus |
