Clone BO24165 Report

Search the DGRC for BO24165

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:65
Vector:pDNR-Dual
Associated Gene/TranscriptCG11585-RB
Protein status:BO24165.pep: Imported from assembly
Sequenced Size:1060

Clone Sequence Records

BO24165.complete Sequence

1060 bp assembled on 2010-05-05

GenBank Submission: KX795486

> BO24165.complete
GAAGTTATCAGTCGACATGCACTCCTTTGCCATTCTGATTCTGAGCCTGG
CCTCCGTGGGCCTGGCGACGCCATTGAGTAACACCTATCTGCCGCCGAAA
GTGGGCGCCCAGAGTGGATACAGTGCAGCGGCGTCCAGTTCCTCGGGATC
GTATGCAGCTCCAGCGGCCACCTATGCCCGCAGGTCCCACTCCGTGGCAG
CTCCTTCCAGGCAGTACCTAGCTCCGGCTTCATCGCATGGTAGCTACAGC
TCGGGTGGTTCCTCCTATGCCGCTCCATCTGTGTCCCATGTCTCGTATTC
CGCACCAGCTGCATCGGCATCAGCATCCCATGTCTCGTACTCGGCGCCAG
CTGCAGCCCACAGCTCATATGCCGCCCCATCCGTATCACATGGATCGTAC
TCCTCTGCTTCCCGCACCAGCTACTCAGCTCCCGTGGCTGCTCCATCCAG
GAAGTACCTGGCTCCAGCTGCAGTATCCCACAGCAGTTACTCCGCACCCG
TCGTTTCCCGCAAGAGCTATTCCGCTCCAGCCGTGTCGCATGGATCGTAC
TCCTCCTCGGGAGGTTCCAGTGGCTCCTACTCAGCTCCAGTTGCATCATA
TAGCTCCTATTCCGCTCCAGCTGCCTCCCACACTAGCTATTCCGCACCAG
TGGCCGCTCCTTCCAGGCAATATCTCGCTCCGGCTGCCTCATCCTACTCC
GCCCCAGCGGTATCATCCTACTCCGCACCAGCGGTATCATCCTACTCCGC
TCCAGCGGTCTCATCCTACTCCGCGCCAGCGGTATCCCACGGATCATCGT
ACTCCACCTCATCGCTATCCCATGGATCGTATGCCGCTCCATCGGTTTCC
AGCAAGACCTATGCCGCCCCAGCTGTCTCCCATGGCAGCTACTCGGGTTC
CAGCTCAGGATCTGGCCACGGATACGGATCTGGCTCCAGCCATGGATCGG
GAGTGCGTTCTGGCCACGGATCTAGCTTCGGATCTGGACACAAATCGGGT
TCCTACGCTGCCAATGGTGGCTACGAGTACCGCCTAAAGCATGCAAGCTT
TCTAGACCAT

BO24165.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:27:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG11585-RB 1029 CG11585-PB 1..1026 17..1042 5130 100 Plus
CG11585-RB 1029 CG11585-PB 673..743 713..783 295 94.4 Plus
CG11585-RB 1029 CG11585-PB 697..767 689..759 295 94.4 Plus
CG11585-RB 1029 CG11585-PB 673..722 737..786 205 94 Plus
CG11585-RB 1029 CG11585-PB 721..770 689..738 205 94 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:27:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG11585-RB 1165 CG11585-RB 52..1077 17..1042 5130 100 Plus
CG11585-RB 1165 CG11585-RB 724..794 713..783 295 94.4 Plus
CG11585-RB 1165 CG11585-RB 748..818 689..759 295 94.4 Plus
CG11585-RB 1165 CG11585-RB 724..773 737..786 205 94 Plus
CG11585-RB 1165 CG11585-RB 772..821 689..738 205 94 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:27:45
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14189644..14190667 19..1042 5120 100 Plus
X 23542271 X 14190314..14190384 713..783 295 94.4 Plus
X 23542271 X 14190338..14190408 689..759 295 94.4 Plus
X 23542271 X 14190314..14190363 737..786 205 94 Plus
X 23542271 X 14190362..14190411 689..738 205 94 Plus
Blast to na_te.dros performed on 2014-11-28 02:27:45 has no hits.

BO24165.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:51 Download gff for BO24165.complete
Subject Subject Range Query Range Percent Splice Strand
CG11585-RB 52..1077 17..1044 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:01 Download gff for BO24165.complete
Subject Subject Range Query Range Percent Splice Strand
CG11585-RB 52..1077 17..1044 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:48 Download gff for BO24165.complete
Subject Subject Range Query Range Percent Splice Strand
CG11585-RB 52..1077 17..1044 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:48 Download gff for BO24165.complete
Subject Subject Range Query Range Percent Splice Strand
X 14189643..14190667 17..1044 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:01 Download gff for BO24165.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14083676..14084700 17..1044 99   Plus

BO24165.pep Sequence

Translation from 16 to 1060

> BO24165.pep
MHSFAILILSLASVGLATPLSNTYLPPKVGAQSGYSAAASSSSGSYAAPA
ATYARRSHSVAAPSRQYLAPASSHGSYSSGGSSYAAPSVSHVSYSAPAAS
ASASHVSYSAPAAAHSSYAAPSVSHGSYSSASRTSYSAPVAAPSRKYLAP
AAVSHSSYSAPVVSRKSYSAPAVSHGSYSSSGGSSGSYSAPVASYSSYSA
PAASHTSYSAPVAAPSRQYLAPAASSYSAPAVSSYSAPAVSSYSAPAVSS
YSAPAVSHGSSYSTSSLSHGSYAAPSVSSKTYAAPAVSHGSYSGSSSGSG
HGYGSGSSHGSGVRSGHGSSFGSGHKSGSYAANGGYEYRLKHASFLDH

BO24165.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:06:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG11585-PB 342 CG11585-PB 1..342 1..342 1712 100 Plus
Vml-PB 578 CG34333-PB 189..547 12..332 466 45.6 Plus
Vml-PA 578 CG34333-PA 189..547 12..332 466 45.6 Plus
Vml-PB 578 CG34333-PB 109..460 12..343 454 44.1 Plus
Vml-PA 578 CG34333-PA 109..460 12..343 454 44.1 Plus
CG32603-PA 345 CG32603-PA 1..339 1..311 451 41.9 Plus
Vml-PB 578 CG34333-PB 81..431 8..338 445 44.8 Plus
Vml-PA 578 CG34333-PA 81..431 8..338 445 44.8 Plus
Vml-PB 578 CG34333-PB 157..507 12..336 441 46.2 Plus
Vml-PA 578 CG34333-PA 157..507 12..336 441 46.2 Plus
Muc91C-PB 949 CG7709-PB 258..644 13..338 434 38.2 Plus
Vml-PB 578 CG34333-PB 51..335 21..338 424 47.7 Plus
Vml-PA 578 CG34333-PA 51..335 21..338 424 47.7 Plus
Vml-PB 578 CG34333-PB 281..549 10..293 354 43.2 Plus
Vml-PA 578 CG34333-PA 281..549 10..293 354 43.2 Plus
Vml-PB 578 CG34333-PB 313..566 10..256 270 39.9 Plus
Vml-PA 578 CG34333-PA 313..566 10..256 270 39.9 Plus
Vml-PB 578 CG34333-PB 49..231 163..344 249 44 Plus
Vml-PA 578 CG34333-PA 49..231 163..344 249 44 Plus
Vml-PB 578 CG34333-PB 387..576 12..178 165 38.3 Plus
Vml-PA 578 CG34333-PA 387..576 12..178 165 38.3 Plus