Clone BO24168 Report

Search the DGRC for BO24168

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG15125-RA
Protein status:BO24168.pep: Imported from assembly
Sequenced Size:793

Clone Sequence Records

BO24168.complete Sequence

793 bp assembled on 2010-05-05

GenBank Submission: KX798043

> BO24168.complete
GAAGTTATCAGTCGACATGGAGGGTTTCGAGTATGTGGTCAATCCTCCAG
TATGGCCGAAAGTCGGATTTCTCAGGAAAATCCATCGGGACTCGAGCGGA
GACTTCTGTAGGGACAGCTACACCAAAAATATTCCGTCGGTCGCTCCTAA
TACGTATGATGTTCCCAGACCAATGGGATTTAAGTACCCGTCAAAGGCAG
GATTTTCTGCCTTGGCCAACAAGATGCCACGATTACCAATCTTTCGAGAA
CTGGGATATCCCCCTATTGGATCCTACGCTACCGATTTTCCAGGAACTCA
ATACTACTTCACTTTCAACAAGCAAACTGTGCGTGAACAAAAATGGTTGA
CACCCGGGCCGTCAACCTATACGCACCACCTCAAATATCCGGACTGGGAC
GTGGAGACAGCTTTCGGATCCAAGCGCATCATCTGGCCAGCAGTGGCCGT
ATTTTGCAGTCCCCAAAACATTGTCAAATGCTCGACATGTGGCGAAAAGC
CAGTGGGTGACTATTTTCACAACTTTAGCAATGACGCGGACATGTGCCGA
CAATGCATGCATGTCGAGATGGCGGCGATCAAGAAGTGCAATCTTCAGGT
GACGGAGCGGTATAGTCGGCAGCAGAAAATCAAGCAATTCGTACCGGCCA
GATACTGCGGATTCTTCCACGATCACAACCAAACTACGGCCACAATTGAA
CGGGATTCGCGAAAAGTGCTGCGCCAAAAGATACGCGTGGAAAATTACTT
GTATCGGCTGAATGCAAAGATAGAAGCAAGCTTTCTAGACCAT

BO24168.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:28:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG15125-RA 762 CG15125-PA 1..759 17..775 3795 100 Plus
CG15125-RB 849 CG15125-PB 94..846 23..775 3765 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:28:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG15125-RA 1071 CG15125-RA 298..1056 17..775 3795 100 Plus
CG15125-RB 886 CG15125-RB 119..871 23..775 3765 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:27:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19659166..19659584 357..775 2095 100 Plus
2R 25286936 2R 19658909..19659084 183..358 880 100 Plus
2R 25286936 2R 19658660..19658821 23..184 810 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:27:59 has no hits.

BO24168.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:53 Download gff for BO24168.complete
Subject Subject Range Query Range Percent Splice Strand
CG15125-RA 88..846 17..777 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:04 Download gff for BO24168.complete
Subject Subject Range Query Range Percent Splice Strand
CG15125-RA 298..1056 17..777 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:54 Download gff for BO24168.complete
Subject Subject Range Query Range Percent Splice Strand
CG15125-RA 298..1056 17..777 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:54 Download gff for BO24168.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19658655..19658821 17..184 98 -> Plus
2R 19658911..19659083 185..357 100 -> Plus
2R 19659167..19659584 358..777 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:04 Download gff for BO24168.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15546160..15546326 17..184 98 -> Plus
arm_2R 15546416..15546588 185..357 100 -> Plus
arm_2R 15546672..15547089 358..777 99   Plus

BO24168.pep Sequence

Translation from 16 to 793

> BO24168.pep
MEGFEYVVNPPVWPKVGFLRKIHRDSSGDFCRDSYTKNIPSVAPNTYDVP
RPMGFKYPSKAGFSALANKMPRLPIFRELGYPPIGSYATDFPGTQYYFTF
NKQTVREQKWLTPGPSTYTHHLKYPDWDVETAFGSKRIIWPAVAVFCSPQ
NIVKCSTCGEKPVGDYFHNFSNDADMCRQCMHVEMAAIKKCNLQVTERYS
RQQKIKQFVPARYCGFFHDHNQTTATIERDSRKVLRQKIRVENYLYRLNA
KIEASFLDH

BO24168.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:07:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG15125-PA 253 CG15125-PA 1..253 1..253 1398 100 Plus
CG15125-PB 282 CG15125-PB 32..282 3..253 1388 100 Plus