BO24168.complete Sequence
793 bp assembled on 2010-05-05
GenBank Submission: KX798043
> BO24168.complete
GAAGTTATCAGTCGACATGGAGGGTTTCGAGTATGTGGTCAATCCTCCAG
TATGGCCGAAAGTCGGATTTCTCAGGAAAATCCATCGGGACTCGAGCGGA
GACTTCTGTAGGGACAGCTACACCAAAAATATTCCGTCGGTCGCTCCTAA
TACGTATGATGTTCCCAGACCAATGGGATTTAAGTACCCGTCAAAGGCAG
GATTTTCTGCCTTGGCCAACAAGATGCCACGATTACCAATCTTTCGAGAA
CTGGGATATCCCCCTATTGGATCCTACGCTACCGATTTTCCAGGAACTCA
ATACTACTTCACTTTCAACAAGCAAACTGTGCGTGAACAAAAATGGTTGA
CACCCGGGCCGTCAACCTATACGCACCACCTCAAATATCCGGACTGGGAC
GTGGAGACAGCTTTCGGATCCAAGCGCATCATCTGGCCAGCAGTGGCCGT
ATTTTGCAGTCCCCAAAACATTGTCAAATGCTCGACATGTGGCGAAAAGC
CAGTGGGTGACTATTTTCACAACTTTAGCAATGACGCGGACATGTGCCGA
CAATGCATGCATGTCGAGATGGCGGCGATCAAGAAGTGCAATCTTCAGGT
GACGGAGCGGTATAGTCGGCAGCAGAAAATCAAGCAATTCGTACCGGCCA
GATACTGCGGATTCTTCCACGATCACAACCAAACTACGGCCACAATTGAA
CGGGATTCGCGAAAAGTGCTGCGCCAAAAGATACGCGTGGAAAATTACTT
GTATCGGCTGAATGCAAAGATAGAAGCAAGCTTTCTAGACCAT
BO24168.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:28:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15125-RA | 762 | CG15125-PA | 1..759 | 17..775 | 3795 | 100 | Plus |
CG15125-RB | 849 | CG15125-PB | 94..846 | 23..775 | 3765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:28:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15125-RA | 1071 | CG15125-RA | 298..1056 | 17..775 | 3795 | 100 | Plus |
CG15125-RB | 886 | CG15125-RB | 119..871 | 23..775 | 3765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:27:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19659166..19659584 | 357..775 | 2095 | 100 | Plus |
2R | 25286936 | 2R | 19658909..19659084 | 183..358 | 880 | 100 | Plus |
2R | 25286936 | 2R | 19658660..19658821 | 23..184 | 810 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:27:59 has no hits.
BO24168.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:53 Download gff for
BO24168.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15125-RA | 88..846 | 17..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:04 Download gff for
BO24168.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15125-RA | 298..1056 | 17..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:54 Download gff for
BO24168.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15125-RA | 298..1056 | 17..777 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:54 Download gff for
BO24168.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19658655..19658821 | 17..184 | 98 | -> | Plus |
2R | 19658911..19659083 | 185..357 | 100 | -> | Plus |
2R | 19659167..19659584 | 358..777 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:04 Download gff for
BO24168.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15546160..15546326 | 17..184 | 98 | -> | Plus |
arm_2R | 15546416..15546588 | 185..357 | 100 | -> | Plus |
arm_2R | 15546672..15547089 | 358..777 | 99 | | Plus |
BO24168.pep Sequence
Translation from 16 to 793
> BO24168.pep
MEGFEYVVNPPVWPKVGFLRKIHRDSSGDFCRDSYTKNIPSVAPNTYDVP
RPMGFKYPSKAGFSALANKMPRLPIFRELGYPPIGSYATDFPGTQYYFTF
NKQTVREQKWLTPGPSTYTHHLKYPDWDVETAFGSKRIIWPAVAVFCSPQ
NIVKCSTCGEKPVGDYFHNFSNDADMCRQCMHVEMAAIKKCNLQVTERYS
RQQKIKQFVPARYCGFFHDHNQTTATIERDSRKVLRQKIRVENYLYRLNA
KIEASFLDH
BO24168.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:07:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15125-PA | 253 | CG15125-PA | 1..253 | 1..253 | 1398 | 100 | Plus |
CG15125-PB | 282 | CG15125-PB | 32..282 | 3..253 | 1388 | 100 | Plus |