BO24169.complete Sequence
679 bp assembled on 2012-04-24
GenBank Submission: KX798869
> BO24169.complete
GAAGTTATCAGTCGACATGAACACCAACACCATCAACCCTCAGGACGACT
GTAGTAACATCTCCAACAAGGATGTAGAGATCGATCGGGACCAGGAGCTC
CAGACATCATCCGAAATCCAGACACCGGAAACACCGCAGACAGGGCGGCG
CAAAAGGATGGACACGCCCATTCGAGTACGTGACATGATCAACCTTTACA
ACTTTGCCACTCAAAAGAACCAGGAACTGGAGATGGCCAAGTCCCTTTAC
TTTGGCGCCATGTCAGAGGAAAACCAGAGGACGGATCTTGAGGGCGGTAG
TAGCCTTTGCAACATGTCCATGTCGGACGACAAGGAAAAAGAAAATGAGA
GTATCCTCCGAGTGAACAAGGAGTCTGCAGTCTTCCAATCGGCCAATACT
GAGCTTCCGTCTGATCCGAATACAGTAGAAAGGTCCTATCAAAGCAAAAC
TACAATTCGACACACTAATAAAGGCGTGCGTATAATCATCGACATATTTT
TTGATAAAAAAGATAGCGAGATAGACATAGTGGGCAGCCGCGTGGAGACG
GACATCCCCGAGAGCCGCATCCTGTCCGATTTCCAGCAGCATTCGCTGGA
CATGAAGAACCAGGAGCTAAAGCCGGGGATCCAGGATGGATCGAGTACCC
CCAAGTCCGCGGCAAGCTTTCTAGACCAT
BO24169.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:28:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10317-RD | 648 | CG10317-PD | 1..645 | 17..661 | 3225 | 100 | Plus |
CG10317-RC | 648 | CG10317-PC | 1..645 | 17..661 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:28:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10317-RD | 1481 | CG10317-RD | 202..847 | 16..661 | 3230 | 100 | Plus |
CG10317-RC | 965 | CG10317-RC | 202..847 | 16..661 | 3230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:28:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16370003..16370332 | 345..16 | 1650 | 100 | Minus |
3R | 32079331 | 3R | 16369489..16369680 | 661..470 | 960 | 100 | Minus |
3R | 32079331 | 3R | 16369816..16369944 | 474..346 | 645 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:28:02 has no hits.
BO24169.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-06 11:57:03 Download gff for
BO24169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10317-RB | 203..665 | 17..480 | 99 | == | Plus |
CG10317-RB | 666..808 | 519..663 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:28 Download gff for
BO24169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10317-RD | 203..847 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:00 Download gff for
BO24169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10317-RC | 203..847 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:11:50 Download gff for
BO24169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10317-RC | 203..847 | 17..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:11:50 Download gff for
BO24169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16369487..16369676 | 474..663 | 98 | <- | Minus |
3R | 16369817..16369944 | 346..473 | 100 | <- | Minus |
3R | 16370003..16370331 | 17..345 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:00 Download gff for
BO24169.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12195725..12196053 | 17..345 | 100 | | Minus |
arm_3R | 12195209..12195398 | 474..663 | 98 | <- | Minus |
arm_3R | 12195539..12195666 | 346..473 | 100 | <- | Minus |
BO24169.pep Sequence
Translation from 16 to 679
> BO24169.pep
MNTNTINPQDDCSNISNKDVEIDRDQELQTSSEIQTPETPQTGRRKRMDT
PIRVRDMINLYNFATQKNQELEMAKSLYFGAMSEENQRTDLEGGSSLCNM
SMSDDKEKENESILRVNKESAVFQSANTELPSDPNTVERSYQSKTTIRHT
NKGVRIIIDIFFDKKDSEIDIVGSRVETDIPESRILSDFQQHSLDMKNQE
LKPGIQDGSSTPKSAASFLDH
BO24169.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10317-PD | 215 | CG10317-PD | 1..215 | 1..215 | 1096 | 100 | Plus |
CG10317-PC | 215 | CG10317-PC | 1..215 | 1..215 | 1096 | 100 | Plus |