Clone BO24170 Report

Search the DGRC for BO24170

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:70
Vector:pDNR-Dual
Associated Gene/TranscriptCG11726-RA
Protein status:BO24170.pep: Imported from assembly
Sequenced Size:907

Clone Sequence Records

BO24170.complete Sequence

907 bp assembled on 2010-05-05

GenBank Submission: KX795725

> BO24170.complete
GAAGTTATCAGTCGACATGGCAAAGATGTCCAAGTCATCGCGTAGCTTCA
AGCTGCCACCAGTCAGCTCCTCTTCCGTGTCCTCGGTCTCCGGCAGCGAA
TCCGGGCAAGGATTGGAAGACATGTTGCACGTGACAAAGGTGCGAACTTC
CCAGGTGGACAACGCAGAGCTTTTCATGTACGGCGACGGGCCCAAAAAAT
CGAATTCAGATCTGCAGAAAAAGGTCAGTACACCCGATCCGGAAGAGGAG
GTGTCAATGGAACCACCATTTGTGGCATTGGTCAGCAATTTGCCAATGGA
GTGCACTGAAGGCGAGTTGCGGAAAGTGTTCACCAGTTTTTCGATCCGTT
CTCTAACCATTCCGAAGAAGGGAAAGCGACCCAAGGGATTTGCGTATGTG
GAAATGGATTCCCGCGAGGATCTCGTTCGTCTGCTCAAAATGGATAAGCT
TAAGTGCCGTGGTCGTTGTCTTATGGCCAAAATAGGCCAATTGCCACCCG
AACCACCGACAAAGGCAGCTGGAGATGGCTTTTCATTATTTACTTGTTCA
GGCAGGCAATTTGATATAAACTCTAGCCATTATTCGGCCAGTGTCAGTGA
TCTCAGCACCATCGATTCGCCAATCTCTGCGAGGAACTCACCATTTCCTT
CGGAAAGTGAGTCGTCCTTTTTCGGCAGGGATAATCCTATAAAAAGAATT
CCTAGTAGCACTGAGGAAGTGGAACGCCGTATGCAAATTCGTCTTCAGAA
ACTAGCCGAATTCGAAAATTCTGAATCGGAGAGAATTAAGAGTGAATGCG
AGGATGATCCGGATGCCTTCATGTCCTGGAGCGATGCCCTAGACGAGATT
AGAAAATCTGAAACTGATTCCTCAAATCATACTGAATCCGCAAGCTTTCT
AGACCAT

BO24170.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:28:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG11726-RA 876 CG11726-PA 1..873 17..889 4365 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:28:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG11726-RA 984 CG11726-RA 82..954 17..889 4365 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:28:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11394771..11395643 17..889 4365 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:28:08 has no hits.

BO24170.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:56 Download gff for BO24170.complete
Subject Subject Range Query Range Percent Splice Strand
CG11726-RA 1..873 17..891 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:09 Download gff for BO24170.complete
Subject Subject Range Query Range Percent Splice Strand
CG11726-RA 82..954 17..891 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:55 Download gff for BO24170.complete
Subject Subject Range Query Range Percent Splice Strand
CG11726-RA 82..954 17..891 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:55 Download gff for BO24170.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11394771..11395643 17..891 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:09 Download gff for BO24170.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11387871..11388743 17..891 99   Plus

BO24170.pep Sequence

Translation from 16 to 907

> BO24170.pep
MAKMSKSSRSFKLPPVSSSSVSSVSGSESGQGLEDMLHVTKVRTSQVDNA
ELFMYGDGPKKSNSDLQKKVSTPDPEEEVSMEPPFVALVSNLPMECTEGE
LRKVFTSFSIRSLTIPKKGKRPKGFAYVEMDSREDLVRLLKMDKLKCRGR
CLMAKIGQLPPEPPTKAAGDGFSLFTCSGRQFDINSSHYSASVSDLSTID
SPISARNSPFPSESESSFFGRDNPIKRIPSSTEEVERRMQIRLQKLAEFE
NSESERIKSECEDDPDAFMSWSDALDEIRKSETDSSNHTESASFLDH

BO24170.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:07:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG11726-PA 291 CG11726-PA 1..291 1..291 1484 100 Plus