BO24175.complete Sequence
700 bp assembled on 2010-05-05
GenBank Submission: KX796454
> BO24175.complete
GAAGTTATCAGTCGACATGGCCCCCAACGATCCATCGCATCCTGGTGGAA
AGTCAACCGCCGTGGCGATGGCCACCAGCCACACCATCTCATACGTGCAA
TGCCAGAACCTCAAATACAACGTCATTATCCTCGGCTGGCTGGGCGTGAT
CATCTCCACCGTCATCTTGGGCAGCTCGGCGCTGACCATCCACTTTCGTC
CGGACATCGAGCTGCTGCTAAACCAGTGGCCCATGAACTTGGTCCCGGTC
GCAGAACAGCAGCTACTGATCAATTTGTTGACCATCTTTAGCTCCATTGT
GTACGGACTGTCGCTGATCAACATGGGCGTCAGTCTGCTGCTGCTGATTG
GTATTGCCCGGGACTCAAGCTGCCTAATTTATCCTTGGCTGATCTATCAT
GGCGTTATTTTTGGCTTTGGTCTTTACTTGGGGGTTTTCTACGCGACCGC
AGGTCTGTTCATTGACCTGTCGAGCTTTCTAATGTGTCTTCTGGTGTTCA
ACCTTGTGCTGGTTATATTTTATAAGATCTATCACGAGGTCTTCACCCTA
TTTCGCGTGATGGAGCAGCTGTCGAAGGATGGCGGAATGGGCGGACTCTA
CTACCAGGATGCGGAGCATGGATGGACTGCGGCTGGGGTTCCCTTTCAAC
ATGTCTATGTGCCGCGTCTGCCGATGCAAAAGGCAAGCTTTCTAGACCAT
BO24175.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:22:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13747-RA | 669 | CG13747-PA | 1..666 | 17..682 | 3330 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:22:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13747-RA | 979 | CG13747-RA | 151..818 | 15..682 | 3340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:22:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9017965..9018225 | 15..275 | 1305 | 100 | Plus |
| 2R | 25286936 | 2R | 9018701..9018871 | 512..682 | 855 | 100 | Plus |
| 2R | 25286936 | 2R | 9018497..9018648 | 361..512 | 760 | 100 | Plus |
| 2R | 25286936 | 2R | 9018290..9018376 | 276..362 | 435 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:22:36 has no hits.
BO24175.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:12 Download gff for
BO24175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13747-RA | 113..778 | 17..684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:51 Download gff for
BO24175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13747-RA | 153..818 | 17..684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:54 Download gff for
BO24175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13747-RA | 153..818 | 17..684 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:54 Download gff for
BO24175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9017967..9018225 | 17..275 | 100 | -> | Plus |
| 2R | 9018290..9018375 | 276..361 | 100 | -> | Plus |
| 2R | 9018498..9018648 | 362..512 | 100 | -> | Plus |
| 2R | 9018702..9018871 | 513..684 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:51 Download gff for
BO24175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4905472..4905730 | 17..275 | 100 | -> | Plus |
| arm_2R | 4905795..4905880 | 276..361 | 100 | -> | Plus |
| arm_2R | 4906003..4906153 | 362..512 | 100 | -> | Plus |
| arm_2R | 4906207..4906376 | 513..684 | 98 | | Plus |
BO24175.pep Sequence
Translation from 16 to 700
> BO24175.pep
MAPNDPSHPGGKSTAVAMATSHTISYVQCQNLKYNVIILGWLGVIISTVI
LGSSALTIHFRPDIELLLNQWPMNLVPVAEQQLLINLLTIFSSIVYGLSL
INMGVSLLLLIGIARDSSCLIYPWLIYHGVIFGFGLYLGVFYATAGLFID
LSSFLMCLLVFNLVLVIFYKIYHEVFTLFRVMEQLSKDGGMGGLYYQDAE
HGWTAAGVPFQHVYVPRLPMQKASFLDH
BO24175.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13747-PA | 222 | CG13747-PA | 1..222 | 1..222 | 1155 | 100 | Plus |
| CG15098-PA | 186 | CG15098-PA | 2..160 | 24..183 | 156 | 26.4 | Plus |
