Clone BO24179 Report

Search the DGRC for BO24179

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:79
Vector:pDNR-Dual
Associated Gene/TranscriptCG14579-RA
Protein status:BO24179.pep: Imported from assembly
Sequenced Size:823

Clone Sequence Records

BO24179.complete Sequence

823 bp assembled on 2010-05-05

GenBank Submission: KX794097

> BO24179.complete
GAAGTTATCAGTCGACATGACCATAATGGCTATATCAAACGACACATTTG
AAAATGAACAGCAGGTGGCGGTAAGGCAAGAAGCACCCAATGCCATTGGT
AACATCCCGGATGTGGTGGAGTCGGCTTCCCGCCCACAAAAATACACGTT
CCATGAGATCTATCAGATGATTACAGCCCTCACCTGGCCCCGAATTCTGT
TTGATTTGCTCGTGCGCCACGAGTGGAACTCCATCTTTTTGAGCCTAGGC
TTTCTTATCCTCAATGCCTTCGAGGTCCTTCAAAGCTTCAATCTGTTGCA
ACAGCTGGCTGTAGTCGGCATGATGATCCTGAGCAACATAATGATCTACA
AGGCCATCCGGCCGTATGTGCGATTCCATCTTTACGAGCGTCTGATCCGC
GCCGATTTCAATGTGCACATCACCCAGGAAATGGTTGTGCGCGTGGTCAA
CTGTGTAAATCGCTGCTTGGTCACGCTGCATTGCATCCTCTTTCAAACTG
AAATCTTCGAGCTCTTTTTGATGATGCTTGCCCTGGAGGCAGTGCGTAAC
ATCATCTGGTATACTAACATCTTCTTGCTAATTAGGATCGTCTTATGTGT
GACGTTGTTTTTTCCAAGGCTTTTCGATAATGATATTGATAATGCGTCGA
GCAGAGCCTATTATCAGATATGTGTGCTGCAGATCGTTGACAAGCTTGAG
GAGATAGGCGTGGAGGTGCATCTAGGCATCATTGAGCGCTGGAAGCAGGA
AGTGGATGCCATGAGGGAGTTGTATTACGAGATTGAGGACTGGCCAAACC
AAGAGGCAAGCTTTCTAGACCAT

BO24179.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:22:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14579-RA 792 CG14579-PA 1..789 17..805 3945 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:22:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14579-RA 1156 CG14579-RA 131..919 17..805 3945 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:22:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21193383..21193956 17..590 2870 100 Plus
X 23542271 X 21194069..21194284 590..805 1080 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:22:50 has no hits.

BO24179.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:15 Download gff for BO24179.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 131..919 17..807 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:57 Download gff for BO24179.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 131..919 17..807 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:58 Download gff for BO24179.complete
Subject Subject Range Query Range Percent Splice Strand
CG14579-RA 131..919 17..807 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:58 Download gff for BO24179.complete
Subject Subject Range Query Range Percent Splice Strand
X 21193383..21193956 17..590 100 -> Plus
X 21194070..21194284 591..807 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:57 Download gff for BO24179.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21065097..21065311 591..807 99   Plus
arm_X 21064410..21064983 17..590 100 -> Plus

BO24179.pep Sequence

Translation from 16 to 823

> BO24179.pep
MTIMAISNDTFENEQQVAVRQEAPNAIGNIPDVVESASRPQKYTFHEIYQ
MITALTWPRILFDLLVRHEWNSIFLSLGFLILNAFEVLQSFNLLQQLAVV
GMMILSNIMIYKAIRPYVRFHLYERLIRADFNVHITQEMVVRVVNCVNRC
LVTLHCILFQTEIFELFLMMLALEAVRNIIWYTNIFLLIRIVLCVTLFFP
RLFDNDIDNASSRAYYQICVLQIVDKLEEIGVEVHLGIIERWKQEVDAMR
ELYYEIEDWPNQEASFLDH

BO24179.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG14579-PA 263 CG14579-PA 1..263 1..263 1356 100 Plus