Clone BO24180 Report

Search the DGRC for BO24180

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:80
Vector:pDNR-Dual
Associated Gene/TranscriptCG11815-RA
Protein status:BO24180.pep: Imported from assembly
Sequenced Size:883

Clone Sequence Records

BO24180.complete Sequence

883 bp assembled on 2010-05-05

GenBank Submission: KX794000

> BO24180.complete
GAAGTTATCAGTCGACATGTCTAAGAATCCACTTCGATTGTTCATAAAAC
CTGTAATTCTTCGCCGCCTGTCTGATAAGCCCAAGTTGAGCAACAAGCCA
TCGAACACCCCTCGCCCACCAAAGGATCCACCGGATGAGGGCTACCAACC
GACCAGTGTCGATCACAATGGGATCGATGTGCCGCCGTTTGTGAGACCCT
CTTCCTTCCGCCAGTTCAGTGGACCGGATGAGAAGCTGGGACCAGGAGCA
GGCAAAGCGCTGCCCTACAAGAACCCAACTTACTTTGGCTATCATCGATT
CTCATTTATGGAACTCACGGTCACGGCTGTGGAGTTACGAGACGAACGTC
GATTGGACGGAGGACTACAGGCATCCATCGAAGCCGACGAAGAATCCGAG
TGTGGCGAGGCCCAACTGGAGACCATGAAGAAGCTGGAAAGCGAGTGCGA
TGCGATACTCTCCAACCAAGCCAAGAAAATCCAGAAGGCCAAATCTTCGG
CCGAGGAGAAGTGTCTCCAGGAGATGAGTGAGGAGGAGCTAAAGGAGTGG
TGCAAGAAAAAGGAGGAGGACATCAAAAAGAAGGAGCAGGAAAAGAAGGA
GGCCAAGTCCTCGCCCAAGGAGAAGAAAATCCAGGACATGAGCGAGGAGG
AACTGAAGGCTTGGTGCCAGAAAAAGGAAGAGGACATCAAAAAGAAGGAG
CAGGAAAAGAAGGAGGCCAAGTCCTCGCCCAAGGAGAAGAAAGTCCAGGA
CATGAGCGAGGATGAACTGAAAGCTTGGTGCCAAAAGAAGGAAGAAGACA
TCAAAAAGAAGGAGCAACAAAAGAAGGAGGAAGGAAAGTGTGAAGGCGAT
GACAACAAAAAGGATGCAAGCTTTCTAGACCAT

BO24180.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:23:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG11815-RA 852 CG11815-PA 1..849 17..865 4245 100 Plus
CG11815-RA 852 CG11815-PA 470..700 600..830 795 89.6 Plus
CG11815-RA 852 CG11815-PA 584..814 486..716 795 89.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:23:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11815-RA 1010 CG11815-RA 71..919 17..865 4245 100 Plus
CG11815-RA 1010 CG11815-RA 540..770 600..830 795 89.6 Plus
CG11815-RA 1010 CG11815-RA 654..884 486..716 795 89.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:23:02
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1970282..1971130 865..17 4245 100 Minus
3L 28110227 3L 1970317..1970547 716..486 795 89.6 Minus
3L 28110227 3L 1970431..1970661 830..600 795 89.6 Minus
Blast to na_te.dros performed on 2014-11-28 02:23:03 has no hits.

BO24180.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:16 Download gff for BO24180.complete
Subject Subject Range Query Range Percent Splice Strand
CG11815-RA 1..849 17..867 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:02 Download gff for BO24180.complete
Subject Subject Range Query Range Percent Splice Strand
CG11815-RA 71..919 17..867 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:04 Download gff for BO24180.complete
Subject Subject Range Query Range Percent Splice Strand
CG11815-RA 71..919 17..867 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:04 Download gff for BO24180.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1970280..1971130 17..867 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:02 Download gff for BO24180.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1970280..1971130 17..867 99   Minus

BO24180.pep Sequence

Translation from 16 to 883

> BO24180.pep
MSKNPLRLFIKPVILRRLSDKPKLSNKPSNTPRPPKDPPDEGYQPTSVDH
NGIDVPPFVRPSSFRQFSGPDEKLGPGAGKALPYKNPTYFGYHRFSFMEL
TVTAVELRDERRLDGGLQASIEADEESECGEAQLETMKKLESECDAILSN
QAKKIQKAKSSAEEKCLQEMSEEELKEWCKKKEEDIKKKEQEKKEAKSSP
KEKKIQDMSEEELKAWCQKKEEDIKKKEQEKKEAKSSPKEKKVQDMSEDE
LKAWCQKKEEDIKKKEQQKKEEGKCEGDDNKKDASFLDH

BO24180.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG11815-PA 283 CG11815-PA 1..283 1..283 1487 100 Plus
rudhira-PE 2075 CG43154-PE 1496..1653 122..288 185 31.5 Plus
rudhira-PC 2075 CG43154-PC 1496..1653 122..288 185 31.5 Plus
rudhira-PE 2075 CG43154-PE 1443..1603 106..274 177 29.6 Plus
rudhira-PC 2075 CG43154-PC 1443..1603 106..274 177 29.6 Plus
rudhira-PE 2075 CG43154-PE 1432..1597 122..283 174 29.8 Plus
rudhira-PC 2075 CG43154-PC 1432..1597 122..283 174 29.8 Plus
CG2839-PA 826 CG2839-PA 243..415 112..282 172 30.2 Plus
CG2839-PA 826 CG2839-PA 304..465 124..276 170 26.5 Plus
rudhira-PE 2075 CG43154-PE 1349..1513 110..283 169 31.1 Plus
rudhira-PE 2075 CG43154-PE 1418..1562 122..271 169 30.7 Plus
rudhira-PC 2075 CG43154-PC 1349..1513 110..283 169 31.1 Plus
rudhira-PC 2075 CG43154-PC 1418..1562 122..271 169 30.7 Plus
CG2839-PA 826 CG2839-PA 571..743 109..283 168 27 Plus
rudhira-PE 2075 CG43154-PE 1378..1541 122..283 167 29.8 Plus
rudhira-PC 2075 CG43154-PC 1378..1541 122..283 167 29.8 Plus
CG2839-PA 826 CG2839-PA 550..726 106..283 165 24.9 Plus
CG2839-PA 826 CG2839-PA 305..449 131..283 163 26.8 Plus
CG2839-PA 826 CG2839-PA 377..514 151..283 162 28.1 Plus
CG2839-PA 826 CG2839-PA 392..555 124..283 162 24.6 Plus
CG2839-PA 826 CG2839-PA 543..714 109..283 162 22.9 Plus
CG2839-PA 826 CG2839-PA 339..502 125..283 161 26.2 Plus
CG2839-PA 826 CG2839-PA 619..748 151..276 158 29.5 Plus
CG2839-PA 826 CG2839-PA 316..482 109..282 157 24.1 Plus
CG2839-PA 826 CG2839-PA 271..438 124..283 156 23.2 Plus
rudhira-PE 2075 CG43154-PE 1400..1569 118..283 155 29 Plus
rudhira-PC 2075 CG43154-PC 1400..1569 118..283 155 29 Plus
CG2839-PA 826 CG2839-PA 521..690 110..283 155 24.9 Plus
CG2839-PA 826 CG2839-PA 287..444 125..284 154 21.9 Plus
CG2839-PA 826 CG2839-PA 625..800 124..289 154 29 Plus
rudhira-PE 2075 CG43154-PE 1480..1610 135..270 153 32.4 Plus
rudhira-PC 2075 CG43154-PC 1480..1610 135..270 153 32.4 Plus
CG13337-PB 680 CG13337-PB 536..680 125..274 153 27.2 Plus
CG2839-PA 826 CG2839-PA 431..600 108..283 151 22.6 Plus