BO24182.complete Sequence
922 bp assembled on 2010-05-05
GenBank Submission: KX796247
> BO24182.complete
GAAGTTATCAGTCGACATGTCGCACCTGGTGATGAGGCGACGGATTCTGC
TTATGGTTTTGCTATTTGCAGGTCCACTACGAAACGCACCTTTCGGCGGT
GCACAGGTGGCGATAGCGACATCACCAACAACTGCTCGTGACCGTCAAAT
TCCGCCGGAGTGGGACCGAAACTGGAAGTTGGATCCGGACTGGGATTTCG
CTGGAAGCGAGGGCAGGGAGTCGGTCGCGCCGATGACGTCACGCACCTTG
GACAACTTTTACCCTTTCGATGGCGGAAATGCCCCGCCGAAAACCAGTGA
AACGGAAATGGATAACCAATTCGGAGATAGCTATCTCGACCCGTATCCTA
CGCTGTTCGGTCGCCAGTGGCACCTCCAGCATCGCAGCAAGCAGCTGCAG
GTGCAGCACAAGTGGCAATCTCCGGTTCCTCCACTTGCGGAAGTCAAGGC
TAAGAGGGATCCCGCCAACTGGCCACCCGACGACGAGGAGCCACCGCTTA
CGTACCCCTACGCCTACACCTTGCCCTGGAAACGAAAGGAGGTTCCGGAC
TCACTCCGATATATGCCCTCGATCAGTGCTGGAGCCATGACCAATCTGGG
CGGCTTTTTCAACCGCCTGGAAGCGAACCTGCGCTTCGCGGAGCAATCGC
AACTGGGTGAGTCGGAGACGCGTATGCTGGAGGGTAAACACCCGCACCCA
CTGCACCTGCCGCCCGTGCCGCCCGACGCTCCGGAGGATTCCGAGCAGAA
GCAGGAGCACGACCGGAAGACATCGAAGCTCCTGCAGGCCCTGCGCAGCT
ACAGGCCCTCCCAGAAGATCCGATCGCTGGTGTCGCGCAATCCGCAGGGA
TACCGCGGCTCCCAGTTCATTGATCCCAGCTACATGTGGCTGGGTCTGGG
CAAAGCAAGCTTTCTAGACCAT
BO24182.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:28:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15082-RB | 891 | CG15082-PB | 1..888 | 17..904 | 4440 | 100 | Plus |
| CG15082-RA | 891 | CG15082-PA | 1..888 | 17..904 | 4440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:28:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15082-RB | 1932 | CG15082-RB | 916..1803 | 17..904 | 4440 | 100 | Plus |
| CG15082-RA | 1170 | CG15082-RA | 154..1041 | 17..904 | 4440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:28:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18832169..18832682 | 69..582 | 2570 | 100 | Plus |
| 2R | 25286936 | 2R | 18832789..18833112 | 581..904 | 1620 | 100 | Plus |
| 2R | 25286936 | 2R | 18831246..18831302 | 17..73 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:28:39 has no hits.
BO24182.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:44:00 Download gff for
BO24182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15082-RA | 1..888 | 17..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:25 Download gff for
BO24182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15082-RA | 154..1041 | 17..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:07 Download gff for
BO24182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15082-RA | 154..1041 | 17..906 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:07 Download gff for
BO24182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18832790..18833112 | 582..906 | 99 | | Plus |
| 2R | 18832172..18832681 | 72..581 | 100 | -> | Plus |
| 2R | 18831246..18831300 | 17..71 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:25 Download gff for
BO24182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14718751..14718805 | 17..71 | 100 | -> | Plus |
| arm_2R | 14719677..14720186 | 72..581 | 100 | -> | Plus |
| arm_2R | 14720295..14720617 | 582..906 | 99 | | Plus |
BO24182.pep Sequence
Translation from 16 to 922
> BO24182.pep
MSHLVMRRRILLMVLLFAGPLRNAPFGGAQVAIATSPTTARDRQIPPEWD
RNWKLDPDWDFAGSEGRESVAPMTSRTLDNFYPFDGGNAPPKTSETEMDN
QFGDSYLDPYPTLFGRQWHLQHRSKQLQVQHKWQSPVPPLAEVKAKRDPA
NWPPDDEEPPLTYPYAYTLPWKRKEVPDSLRYMPSISAGAMTNLGGFFNR
LEANLRFAEQSQLGESETRMLEGKHPHPLHLPPVPPDAPEDSEQKQEHDR
KTSKLLQALRSYRPSQKIRSLVSRNPQGYRGSQFIDPSYMWLGLGKASFL
DH
BO24182.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:07:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15082-PB | 296 | CG15082-PB | 1..296 | 1..296 | 1611 | 100 | Plus |
| CG15082-PA | 296 | CG15082-PA | 1..296 | 1..296 | 1611 | 100 | Plus |
