Clone BO24184 Report

Search the DGRC for BO24184

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:84
Vector:pDNR-Dual
Associated Gene/TranscriptCG15877-RA
Protein status:BO24184.pep: Imported from assembly
Sequenced Size:865

Clone Sequence Records

BO24184.complete Sequence

865 bp assembled on 2010-05-05

GenBank Submission: KX796617

> BO24184.complete
GAAGTTATCAGTCGACATGGCCCGCACTGAACTGGAGAAAAAGGTCAAGC
GCCAGGGCAAAAAACGCAAGCACGAGGTGACTAAGAACCCTGAGCATGCG
GCCAGCGACGACGAGGTGGCCAACAAAAGTCTAATTCTAGCTCCACAGGT
AGATCAACAGGAGGTTCCAACAGATAAACCCGCCAAGAGGCGGCATAAAG
AATCAGAAGTATCGGCCACTAAGAAACAAAGCAGGAAAAACCAAGCGGAG
GAGCAGGTGGCCACCAGTGGAAGCGATGAAAGTCTTCCTCAGAAGCCTCA
GAAGAGAAAACAAGTCCAGGATGCCAACGAAACCAAAAAGCTGAAACGCA
GCAAAACGCAGGAAAATAACTCGGATGAAGACGACGATGTGGACTCCCAG
CCCACAGCAGCGCAACTAAAAGAAGCAGCTCGTCCGGAGAACGCTTATGC
AGTGGTTACAGTGCGCCAAAAGAAGAAACAGAAGCACCAGCAGCGCCTCG
AGGCCCAAAAGAGTCAGAGCTCCAACAAAGATGCCAAAGTCAACAAGGAA
TATCTTCTAAAATGGAAGGAATCCCGCCAGGATTGGAAGTTCAACAAACT
GCGACAGATTTCCATACAACAAACCGCCTTTGATGTGGAGAAACTGGATG
ACGAGCTGTGGCCAACTGCTCTGGAGTATTTGGCCAGTTCCCAGGGAGCA
GCGCGCTCAAAGATCAGTCAGTTGGCCGAGGAGGTGATCCAGAAACTGGA
CAAGGAGGGCGAAAAGCTGGAGGACGAGGCGGAAAGGCGAAAGCTAATCG
AGTCCACGCAGTACCGGCGGGCACGCGATCTCCTCCAAAGCTTCGACGCA
AGCTTTCTAGACCAT

BO24184.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:28:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG15877-RA 834 CG15877-PA 1..831 17..847 4155 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:28:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG15877-RA 1018 CG15877-RA 125..955 17..847 4155 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:28:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2376547..2377224 847..170 3390 100 Minus
3L 28110227 3L 2377276..2377432 173..17 785 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:28:43 has no hits.

BO24184.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:44:00 Download gff for BO24184.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 125..955 17..849 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:28 Download gff for BO24184.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 125..955 17..849 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:09 Download gff for BO24184.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 125..955 17..849 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:09 Download gff for BO24184.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2376545..2377220 174..849 99 <- Minus
3L 2377276..2377432 17..173 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:28 Download gff for BO24184.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2376545..2377220 174..849 99 <- Minus
arm_3L 2377276..2377432 17..173 100   Minus

BO24184.pep Sequence

Translation from 16 to 865

> BO24184.pep
MARTELEKKVKRQGKKRKHEVTKNPEHAASDDEVANKSLILAPQVDQQEV
PTDKPAKRRHKESEVSATKKQSRKNQAEEQVATSGSDESLPQKPQKRKQV
QDANETKKLKRSKTQENNSDEDDDVDSQPTAAQLKEAARPENAYAVVTVR
QKKKQKHQQRLEAQKSQSSNKDAKVNKEYLLKWKESRQDWKFNKLRQISI
QQTAFDVEKLDDELWPTALEYLASSQGAARSKISQLAEEVIQKLDKEGEK
LEDEAERRKLIESTQYRRARDLLQSFDASFLDH

BO24184.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:07:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG15877-PA 277 CG15877-PA 1..277 1..277 1389 100 Plus