BO24185.complete Sequence
691 bp assembled on 2010-05-05
GenBank Submission: KX797012
> BO24185.complete
GAAGTTATCAGTCGACATGGCTTGTGGCAGTGAAGCGATCATCATGAAGT
TTCCCATGCACATGCGTGCCCATCTCCTGGCCGTCCTAAACGATTTTCGG
AATACCGTGGCTAAGGGTCAGTATCCGCACTTGCGTCCAGCTTCCCGGAT
GGCAACACTCCGGTGGCACGAGGAACTGGCCGGGTTGGCCAAGTTTGCCT
TGAGGCGTTGTGACTATATAGACGATTACTGCAGCAATACGGATGAGTTC
AGCTATGTGTCGTATATATATGGCAGTACCAAGTGGTTGCAACTGGAGAA
GGATCCCATATCCGTTTTGGACTTTGTCTTGCAGTTTTGGATGGATGATG
TTAAGGGCTGCACGATGGCCCACATCAATGCCGAGAAACCGGCCAAGGAT
GGACAGTGTCGCGGCTACTTCACCCAGCTGGTCCAAGATTTGGCTGCCCA
TGTCGGCTGTGCCATGATGCTGCGAAAAGGCCAAACGAGCGGACTCTATC
AGTACGGTGTCCTATGTCACTTTTCGCGCGGAAAGATCGCCAATGAGCTG
GTCTACCGGGCAAGTGCTCATCCGGGAAGTCGCTGCTATGCGGGAACCCA
CTCCATATATGAGGGGCTCTGCTCACCCGAGGAGCATGTTAATCCCAATG
CCCTGCAATTGGGCGAGCTTAATGCAAGCTTTCTAGACCAT
BO24185.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:28:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30486-RB | 660 | CG30486-PB | 1..657 | 17..673 | 3285 | 100 | Plus |
| CG30486-RA | 792 | CG30486-PA | 138..789 | 22..673 | 3260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:28:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30486-RB | 845 | CG30486-RB | 147..803 | 17..673 | 3285 | 100 | Plus |
| CG30486-RA | 859 | CG30486-RA | 166..817 | 22..673 | 3260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:28:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12848398..12848778 | 402..22 | 1905 | 100 | Minus |
| 2R | 25286936 | 2R | 12848076..12848347 | 673..402 | 1360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:28:47 has no hits.
BO24185.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:44:01 Download gff for
BO24185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30486-RB | 130..786 | 17..675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:31 Download gff for
BO24185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30486-RB | 130..786 | 17..675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:10 Download gff for
BO24185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30486-RB | 147..803 | 17..675 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:10 Download gff for
BO24185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12848073..12848346 | 403..675 | 99 | <- | Minus |
| 2R | 12848398..12848780 | 17..402 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:31 Download gff for
BO24185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8735578..8735851 | 403..675 | 99 | <- | Minus |
| arm_2R | 8735903..8736285 | 17..402 | 99 | | Minus |
BO24185.pep Sequence
Translation from 16 to 691
> BO24185.pep
MACGSEAIIMKFPMHMRAHLLAVLNDFRNTVAKGQYPHLRPASRMATLRW
HEELAGLAKFALRRCDYIDDYCSNTDEFSYVSYIYGSTKWLQLEKDPISV
LDFVLQFWMDDVKGCTMAHINAEKPAKDGQCRGYFTQLVQDLAAHVGCAM
MLRKGQTSGLYQYGVLCHFSRGKIANELVYRASAHPGSRCYAGTHSIYEG
LCSPEEHVNPNALQLGELNASFLDH
BO24185.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:07:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30486-PB | 219 | CG30486-PB | 1..219 | 1..219 | 1187 | 100 | Plus |
| CG30486-PA | 263 | CG30486-PA | 46..263 | 2..219 | 1179 | 99.5 | Plus |
| CG17575-PA | 291 | CG17575-PA | 50..280 | 3..206 | 301 | 29.4 | Plus |
| antr-PA | 265 | CG30488-PA | 42..249 | 3..213 | 287 | 31.5 | Plus |
| antr-PB | 272 | CG30488-PB | 49..256 | 3..213 | 287 | 31.5 | Plus |
