BO24186.complete Sequence
865 bp assembled on 2010-05-05
GenBank Submission: KX794950
> BO24186.complete
GAAGTTATCAGTCGACATGTTGGCTCTCCGCTTGTTTGTACTGCTGCAGT
GCAGCCTGTTGGTTCTGGCTGGCGTTTGTTTAATACCACAGCCCGTTAAG
AGGCAGCGATCGCTTGAGGATGTTATAAAGAATCCCTGGAAGCTATCACC
CCGCCTGGATGGCCGTATTGTGGGCGGTCACCGCATCAACATCACCGATG
CACCACATCAGGTTTCGCTGCAGACTTCGTCCCATATTTGCGGCGGTTCT
ATTATATCCGAGGAGTGGATATTGACTGCCGCCCATTGCACATATGGTAA
AACGGCAGATCGCCTGAAAGTGCGACTCGGAACCAGCGAATTTGCTCGCA
GTGGCCAACTTCTGCGGGTGCAGAAGATCGTGCAGCACGCCCAGTTCAAC
TACACCAATGTGGACTACGATTTCTCGCTGCTTCAGCTAGCTCATCCCAT
CAAGTTTGACGAGACCAAAAAGGCGGTCAAGCTGCCCGAGTCTCAGATGA
AATACATGGACGGGGAAGCTTGCTTCGTGAGTGGTTGGGGCAACACCCAG
AACCTGCTGGAGTCCCGCGAGTGGCTGCGTCAGGTGGAGGTGCCTCTGGT
CAATCAGGAGCTTTGCAGCGAGAAGTACAAACAGTACGGCGGCGTCACCG
AGCGAATGATCTGTGCTGGATTTCTGGAAGGCGGAAAGGATGCGTGCCAA
GGCGATTCCGGCGGTCCGATGGTCAGTGAATCGGGCGAGCTGGTGGGCGT
GGTTAGCTGGGGCTACGGTTGCGCTAAGCCCGACTATCCGGGTGTCTACT
CAAGAGTAAGTTTCGCACGGGATTGGATCAAGGAGCACAGTGGTGTCGCA
AGCTTTCTAGACCAT
BO24186.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:29:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31954-RA | 834 | CG31954-PA | 1..831 | 17..847 | 4155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:29:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31954-RA | 978 | CG31954-RA | 30..861 | 16..847 | 4160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:28:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3509175..3509727 | 847..295 | 2765 | 100 | Minus |
| 2L | 23513712 | 2L | 3509795..3510073 | 294..16 | 1395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:28:59 has no hits.
BO24186.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:44:02 Download gff for
BO24186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31954-RA | 16..841 | 22..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:35 Download gff for
BO24186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31954-RA | 36..861 | 22..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:14 Download gff for
BO24186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31954-RA | 36..861 | 22..849 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:14 Download gff for
BO24186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3509173..3509727 | 295..849 | 99 | <- | Minus |
| 2L | 3509795..3510067 | 22..294 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:35 Download gff for
BO24186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3509173..3509727 | 295..849 | 99 | <- | Minus |
| arm_2L | 3509795..3510067 | 22..294 | 100 | | Minus |
BO24186.pep Sequence
Translation from 16 to 865
> BO24186.pep
MLALRLFVLLQCSLLVLAGVCLIPQPVKRQRSLEDVIKNPWKLSPRLDGR
IVGGHRINITDAPHQVSLQTSSHICGGSIISEEWILTAAHCTYGKTADRL
KVRLGTSEFARSGQLLRVQKIVQHAQFNYTNVDYDFSLLQLAHPIKFDET
KKAVKLPESQMKYMDGEACFVSGWGNTQNLLESREWLRQVEVPLVNQELC
SEKYKQYGGVTERMICAGFLEGGKDACQGDSGGPMVSESGELVGVVSWGY
GCAKPDYPGVYSRVSFARDWIKEHSGVASFLDH
BO24186.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:07:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31954-PA | 277 | CG31954-PA | 1..277 | 1..277 | 1468 | 100 | Plus |
| Try29F-PD | 267 | CG9564-PD | 36..267 | 45..277 | 667 | 54.5 | Plus |
| Try29F-PC | 267 | CG9564-PC | 36..267 | 45..277 | 667 | 54.5 | Plus |
| CG13430-PB | 267 | CG13430-PB | 29..261 | 48..273 | 460 | 42.5 | Plus |
| CG13430-PA | 267 | CG13430-PA | 29..261 | 48..273 | 460 | 42.5 | Plus |
