BO24187.complete Sequence
601 bp assembled on 2010-05-05
GenBank Submission: KX795432
> BO24187.complete
GAAGTTATCAGTCGACATGGTGTTGCCGAGCAAAAAGTATAAAACCGACT
ACACGGAGAACTCCTATCGTGCCCACATGAAGCTGACGATAAGAAACCTA
CAATATGGTGACTTTGGCAACTATCGATGCATCTCGAAGAACTCGCTGGG
GGAAACGGAAGGCTCCATACGTGTTTACGAAATACCTTTGCCATCCACAC
CATCCAAGCAGGTTACCCACACCACCGTCGAGTCCAGGGAGAACAATATC
ATACCCTCATCACGCAACGACACAACGAAATCCCTGCAAACGGATGTGGG
ATATGCCATGAAGAACGATTTATATCCAGGCTCGGCCTCCTCGTCATCTT
CGGGAGGCAGTTCCTCGGCGGCCTCGTCCTCCTCCTCGATGCAGACCTCG
GCATTGCCAGGAGGAGTGGCGGGAAATAGTCTATCATCGATGGGCTCCAA
AGGATCCTTGGCGATAGGCAAGAGCACGTTCTACACAGAACGACCACCGA
ATGAGTACGCCGCCTCGTCAGTGGCTGGCCTGCTGCTTCATAGAGCATTG
CTGTTCGGCTCTGGAATCTATCTGACCCTGCTTGCAAGCTTTCTAGACCA
T
BO24187.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:29:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34391-RE | 1410 | CG34391-PE | 841..1407 | 17..583 | 2835 | 100 | Plus |
| CG34391-RD | 1410 | CG34391-PD | 841..1407 | 17..583 | 2835 | 100 | Plus |
| CG34391-RB | 570 | CG34391-PB | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:29:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34391-RE | 4735 | CG34391-RE | 1359..1925 | 17..583 | 2835 | 100 | Plus |
| CG34391-RD | 2139 | CG34391-RD | 1359..1925 | 17..583 | 2835 | 100 | Plus |
| CG34391-RB | 882 | CG34391-RB | 102..668 | 17..583 | 2835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:29:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5439190..5439471 | 243..524 | 1410 | 100 | Plus |
| 3L | 28110227 | 3L | 5436522..5436632 | 69..179 | 555 | 100 | Plus |
| 3L | 28110227 | 3L | 5437712..5437775 | 179..242 | 320 | 100 | Plus |
| 3L | 28110227 | 3L | 5439530..5439589 | 524..583 | 300 | 100 | Plus |
| 3L | 28110227 | 3L | 5436260..5436312 | 17..69 | 265 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:29:09 has no hits.
BO24187.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:44:03 Download gff for
BO24187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34391-RB | 62..628 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:40 Download gff for
BO24187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34391-RB | 62..628 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:30:16 Download gff for
BO24187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34391-RB | 102..668 | 17..585 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:30:16 Download gff for
BO24187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5439531..5439589 | 525..585 | 96 | | Plus |
| 3L | 5436260..5436312 | 17..69 | 100 | -> | Plus |
| 3L | 5436523..5436632 | 70..179 | 100 | -> | Plus |
| 3L | 5437713..5437775 | 180..242 | 100 | -> | Plus |
| 3L | 5439190..5439471 | 243..524 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:40 Download gff for
BO24187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5432631..5432689 | 525..585 | 96 | | Plus |
| arm_3L | 5429360..5429412 | 17..69 | 100 | -> | Plus |
| arm_3L | 5429623..5429732 | 70..179 | 100 | -> | Plus |
| arm_3L | 5430813..5430875 | 180..242 | 100 | -> | Plus |
| arm_3L | 5432290..5432571 | 243..524 | 100 | -> | Plus |
BO24187.pep Sequence
Translation from 16 to 601
> BO24187.pep
MVLPSKKYKTDYTENSYRAHMKLTIRNLQYGDFGNYRCISKNSLGETEGS
IRVYEIPLPSTPSKQVTHTTVESRENNIIPSSRNDTTKSLQTDVGYAMKN
DLYPGSASSSSSGGSSSAASSSSSMQTSALPGGVAGNSLSSMGSKGSLAI
GKSTFYTERPPNEYAASSVAGLLLHRALLFGSGIYLTLLASFLDH
BO24187.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:08:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34391-PB | 189 | CG34391-PB | 1..189 | 1..189 | 953 | 100 | Plus |
| CG34391-PE | 469 | CG34391-PE | 281..469 | 1..189 | 953 | 100 | Plus |
| CG34391-PD | 469 | CG34391-PD | 281..469 | 1..189 | 953 | 100 | Plus |
| CG31646-PA | 606 | CG31646-PA | 367..522 | 1..147 | 177 | 30.1 | Plus |
| CG31708-PC | 512 | CG31708-PC | 358..511 | 5..150 | 168 | 33.1 | Plus |
