Clone BO24193 Report

Search the DGRC for BO24193

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:241
Well:93
Vector:pDNR-Dual
Associated Gene/TranscriptCG30338-RA
Protein status:BO24193.pep: Imported from assembly
Sequenced Size:898

Clone Sequence Records

BO24193.complete Sequence

898 bp assembled on 2010-05-05

GenBank Submission: KX795601

> BO24193.complete
GAAGTTATCAGTCGACATGGCCGATGAGGAGCTGCAAACCTACCGTCGCT
GCGTTGGCCTGCAGCTGGAGGAGCTGGAGCTGCTGAGCTCCATATACTGC
GCGCCCGGAGAGCTGCATATGCTCGATGCCGGCGTAGTGGCTGATTTCAA
TGAGTTTCTCAAGGATGATAAGACAAAACCCGCTACTAGCCTTCTATCCC
ATTTGGAGTATGTGGTCAAATTGACTCTACCAGGCAAACAGTGCGTGGAA
GTGCGAGTGGAACTGCCGCACCTATATCCGCTTTTGGAGCAGGCACGCGT
CAGTGTACACACTACGCTACTGGGAAAATCCAAGGAGCAGCGCTTAAAGA
ATGATTTGGAGCAGTATCATGGTGAAAGGCGGGAGGAGGACGCCGAGCCG
TACATCTTCCAGCTGCTGAGCTGGCTGCAGGACCGCATCGAGGATCTGTT
AAAACGACCAGCTTCCGAGTTTGAAGTGCAGCAGGTAGCATCATCAGACC
CGCAACAGCCACCAGCTACGGAACTTCAGAGAATTTGGATTTATTCGCAT
CACATCAAATCCAGTGCCAAGCGGCAGGAGCTGATTCGGCAGGCCCGACA
GTTGGAGCTCACAGGATTCAGTAGACCCGGTAAACCGGGCATCATATGCG
TGGAAGGTGATTCGGCAAATGTACAGGAATTCTGGCGCACCATCAAGGCC
CTGCGCTGGCAGAAGATCAGCGTGGTGCGGACGGAGCCTCGGCAGCGCAA
GCGGGGATTCGAGGACTTCAGCGAACAGCTTTTTAATGCCGAAGAAGGCG
TCATGAACATGGGCCAGTTCATTCGATTCCTCGAAGCCCACGGATTTGGC
TACATGAAGTCGGAATTGTTTGGTTTAGCCGCAAGCTTTCTAGACCAT

BO24193.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:23:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG30338-RA 867 CG30338-PA 1..864 17..880 4320 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:23:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG30338-RA 1039 CG30338-RA 117..981 16..880 4325 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:23:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9598583..9599447 16..880 4325 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:23:21 has no hits.

BO24193.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:18 Download gff for BO24193.complete
Subject Subject Range Query Range Percent Splice Strand
CG30338-RA 84..947 17..882 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:09 Download gff for BO24193.complete
Subject Subject Range Query Range Percent Splice Strand
CG30338-RA 118..981 17..882 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:12 Download gff for BO24193.complete
Subject Subject Range Query Range Percent Splice Strand
CG30338-RA 118..981 17..882 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:12 Download gff for BO24193.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9598584..9599447 17..882 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:09 Download gff for BO24193.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5486089..5486952 17..882 99   Plus

BO24193.pep Sequence

Translation from 16 to 898

> BO24193.pep
MADEELQTYRRCVGLQLEELELLSSIYCAPGELHMLDAGVVADFNEFLKD
DKTKPATSLLSHLEYVVKLTLPGKQCVEVRVELPHLYPLLEQARVSVHTT
LLGKSKEQRLKNDLEQYHGERREEDAEPYIFQLLSWLQDRIEDLLKRPAS
EFEVQQVASSDPQQPPATELQRIWIYSHHIKSSAKRQELIRQARQLELTG
FSRPGKPGIICVEGDSANVQEFWRTIKALRWQKISVVRTEPRQRKRGFED
FSEQLFNAEEGVMNMGQFIRFLEAHGFGYMKSELFGLAASFLDH

BO24193.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG30338-PA 288 CG30338-PA 1..288 1..288 1492 100 Plus