BO24195.complete Sequence
871 bp assembled on 2010-05-05
GenBank Submission: KX794748
> BO24195.complete
GAAGTTATCAGTCGACATGGCCCTGGAAAGTATTTGTGGTATGGATAAGC
TGCCATTTATGAAGAGCTTTGGATATCGCACCTCGAAGCAGACAATTGAA
GAAATCAGAGTCGCATCTAGTAACATGGATAATCCCCTCGCCATAATGGC
TCCGCCATATGAAAATCCACGGGAAAGTGTGAAAAAACTGAATGCGCTAA
GTGAAGTGCAGATAGATTTTGACCACGGAACCACCACGGTGGGTTTTGTT
TACCAAGGTGGCATCATTTTGTGTGTGGATTCCAGAGCCACGTCGGGAAA
GTTAATTGGATCTCAGAGCATACATAAGGTCGTACAGGTCAACCAGTACA
TAATGGGTACCACTGCAGGTGGTGCAGCGGATTGCACATACTGGGATCGA
GCTTTGACCAGGGAGTGCCGACTGCACGAGCTCCGCTATAAGGAGCGACT
TCCAGTCCAATCTGCTGCCAAATATATCTCCAACGTGGCTGCGGAATACA
AGGGAATGGGTCTCTGCATGGGAATGATGCTGGCCGGTTGGTCGCCCGAA
GGACCCAGTTTGGTATACGTGGACTCCAACGGCCTGCGGATCCATGGAAA
GCTTTTCGCCGTGGGCAGTGGAGCCCCCAATGCCCTGGGAATTTTGGACT
CTGACTACCGGTTGGATCTCAGTGATAACGAGGCCTACGACCTGGCCTTC
CTTGCAGTATATCATGCTACCATGACAGATATCTTTTCAGGCGGTGTGGT
GAGACTATATCACATGGATCAAGGAAACTGGAGGAATGTGGCCAATAAAG
ACTGCCAGGAACTGCATGAACAGTACTCAGGTGTGGGAAATCAACAAACT
CCCGCAAGCTTTCTAGACCAT
BO24195.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:23:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta5R2-RB | 840 | CG31742-PB | 1..837 | 17..853 | 4170 | 99.9 | Plus |
| Prosbeta5R2-RA | 840 | CG31742-PA | 1..837 | 17..853 | 4170 | 99.9 | Plus |
| Prosbeta5-RA | 849 | CG12323-PA | 484..529 | 494..539 | 185 | 93.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:23:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta5R2-RB | 1534 | CG31742-RB | 80..918 | 15..853 | 4180 | 99.9 | Plus |
| Prosbeta5R2-RA | 1082 | CG31742-RA | 80..918 | 15..853 | 4180 | 99.9 | Plus |
| Prosbeta5-RA | 1139 | CG12323-RA | 579..624 | 494..539 | 185 | 93.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:23:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17990497..17991335 | 15..853 | 4180 | 99.9 | Plus |
| 2R | 25286936 | 2R | 10820618..10820663 | 494..539 | 185 | 93.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:23:31 has no hits.
BO24195.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-05 11:43:21 Download gff for
BO24195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31742-RA | 82..918 | 17..855 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:13 Download gff for
BO24195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta5R2-RA | 82..918 | 17..855 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:17 Download gff for
BO24195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta5R2-RA | 82..918 | 17..855 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:17 Download gff for
BO24195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17990499..17991335 | 17..855 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:13 Download gff for
BO24195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17990499..17991335 | 17..855 | 99 | | Plus |
BO24195.pep Sequence
Translation from 16 to 871
> BO24195.pep
MALESICGMDKLPFMKSFGYRTSKQTIEEIRVASSNMDNPLAIMAPPYEN
PRESVKKLNALSEVQIDFDHGTTTVGFVYQGGIILCVDSRATSGKLIGSQ
SIHKVVQVNQYIMGTTAGGAADCTYWDRALTRECRLHELRYKERLPVQSA
AKYISNVAAEYKGMGLCMGMMLAGWSPEGPSLVYVDSNGLRIHGKLFAVG
SGAPNALGILDSDYRLDLSDNEAYDLAFLAVYHATMTDIFSGGVVRLYHM
DQGNWRNVANKDCQELHEQYSGVGNQQTPASFLDH
BO24195.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:04:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta5R2-PB | 279 | CG31742-PB | 1..279 | 1..279 | 1467 | 100 | Plus |
| Prosbeta5R2-PA | 279 | CG31742-PA | 1..279 | 1..279 | 1467 | 100 | Plus |
| Prosbeta5R1-PA | 315 | CG9868-PA | 1..274 | 1..274 | 924 | 58.8 | Plus |
| Prosbeta5-PA | 282 | CG12323-PA | 1..279 | 1..277 | 775 | 51.8 | Plus |
| Prosbeta5-PB | 282 | CG12323-PB | 1..279 | 1..277 | 775 | 51.8 | Plus |
